| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1023 |
|---|
| Symbol | |
|---|
| ID | 7081831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 1040030 |
|---|
| End bp | 1042627 |
|---|
| Gene Length | 2598 bp |
|---|
| Protein Length | 865 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643458103 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_002352917 |
|---|
| Protein GI | 217967411 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGTA GTGACATAAG GAAAAAATTT ATAGATTATT TTGTAAGTAA GGACCATCTA
CATTTGCCCA GTGCCTCATT AGTGCCATCC GATGATCCAA CTCTTCTTTT TACCACTGCT
GGAATGGTAC CTTTTAAACC ATATTTCTTA GGTCAGGGCA TACCTCCCAA AAGGAGAATT
ACTACTGTTC AAAAATGTTT TCGAACCACT GATATAGAAA GGGTAGGTAT AACTCCAAGA
CATCTTACAT TTTTGGAGAT GCTTGGAAAT TTTTCCTTTG GAGACTATTT TAAGAGGGAG
GCAATCGGTT TTGCATATGA ATTTTTAACT AAAGAACTTG GAATTCCTAT ATCCAAATTA
TGGATTTCAG TTTACGAAGA AGATGATGAG GCTTATGATA TTTGGAATAA AGAGATAGGA
ATTCCTAAGG AAAGAATTGT AAGATTAGGA AAAGAAGATA ATTTCTGGGG TCCCCCAGGA
CCCACTGGAC CTTGTGGTCC TTGTTCCGAG ATTTATTATG ATTTTGGACC TAAAAGTAAA
GATGAAGAGG ATTGTAAGCC TGGAGACCCC TGTGATAGAT TTATGGAAAT ATGGAATTTA
GTATTTATGG CATATTATAT GGATGAAGAA GGAAAACTTT CTCCTCTTCC TCAGAAAAAT
ATTGATACAG GTATGGGGCT TGAGCGAATC ACCACAGTGG TGGAAGGGGT AAGTAATGTT
TTTGAAACGG ATCTATTTGT TCCTATTATT GAGGAAATCA GGAAGATTGT AAAGGATTCG
GATTCTGTTA CGGAAAGATT AATTTCTGAT CACATTAGAG GAATTACGTT TTTAATGGGA
GACGGTGTAG TACCGACCAA CGAAGGCAGA GGTTATGTTT TAAGAAGACT TATAAGGAGG
TCATTAAGGA GGGCATATAA ACATGGTATA GTGAAACCTT TCTTATACAA GTTAGTCCCT
ATTGTGGTTG ATATAATGAA AGATGCTTAT CCTGATTTAA TAGAAAAAAA AGATTATATT
CAAAAAGTAC TCATAAAGGA AGAGGATCAA TTTTTAAGGA CCTTAGAGCA AGGTCTGTCC
CTCTTAGAAG ACTACTTTAG AAAAGCTCCA AGTAAAACGG TAGGTGGGGA GTTTGCTTTT
AAACTTTATG ATACTTATGG TTTTCCTATT GAGTTAACAA AAGAGATAGC AGAGGAAGAA
GGATTCGTCG TAGATGTAGA CGGTTTTAAC AAATATATGG AGGAGCAAAG AGAAAAAGCA
AGAGCCTCTA TGGAGGCGAA GCTTGAAGAA AGTTTTATTT CTCTTTCCGA TGATGAGGTC
TATCTTATGA AATCTCTCCC TAAATCTGAG TTTGTTGGAT ATGAAGTTTT GGAAAGTGAA
AGTAAGGTAC TCTTCTTCAT TGGAGGAAAA CATGGGAAAA AGATTTCCAA TGGAGAAGAA
GTTTACTTTT TAATGGATAA AACCCCCTTT TATCCCGAAG GAGGAGGTCA AGTCTCTGAT
ACAGGTAAGG TTTATAATTC GGAAGTTGAA GTAATGGTTT TGGAGGTCAA AAGATTAGGA
GAAGATTTCA TTATTCATAG AGGAAAGGTT TTAAAAGGAG AGTTTGAAGA AGGCCAAATA
GTTAGGGCAG AAGTTGATAA GGAGAAAAGA TATCACACTA TGAGACATCA TACCGCAACT
CATCTTCTCC ATGCAGCACT AAGGGAATAT TTAGGTACCC ATGTTATGCA GTCGGGATCC
TTAGTGTCTC CCGAATTTTT AAGATTTGAT TTTACCCATC ATTCTCCCCT AACCTATGAA
GATTTAAAGA TAATAGAAAG AAAAGTAAAT GAAAATATTT TAGCGAACCA TAAGGTAGAG
AAATTCTGGA CTAATTTAGA AGAAGCAAAA AGGATGGGAG CTATTGCTCT GTTTACGGAA
AAATACCAAA AAAATGTGAG AATTATTAAA ATTAATAATG TAAGTATGGA ACTTTGTGGT
GGTACTCATG TGGATTGTAC TGGAGAAATA GGAAGTTTTT ACATAGTGAA AGAAGAAGGA
ATAGGAAGTG GGATAAGGAG AATTTTTGCT GTCTGTGGGT TAAAGGCTTG GGAGTTTCAA
AAGAGAAGAG AAGAAATTCT AAATAAAATC TCTTTCGTAC TTAAGTCTTC TCCCGATGAG
ATTTATGTGA AACTGGAAAA GTTAATTGAT GAAATGAAAG AAAAAGAAAA GAAGATAAAA
GATCTTGAAG AAAGAATAAT TGAGAAAGAG TTGGAAGTTT TGGCTAATAA GATTGAAAAT
TGGGGTGAGT TTTCCTTTAT TTGTACTTAT GTAGATATGG AGAATGAAGC CATAAAAAAG
CTTGGCGATC ACTTAAAGAG TAAAAATGAT AATCTAATTA TGGTTTTCTT TAAGCCCTCA
GATAATAAGC TTTTAGGAAC AATTATGGTG AGCAAAAAAG TAAATTTGAA GGGAATAACT
GCTAAAAAGA TTGTGGAAAT AATTGGAGAA AGATTTAATG GTAAAGGAGG AGGAAAGGAT
ACCTTAGCCC AGATTAGTTT ACCTAAGACT GATATAGAGG ACATAAAGAG AGCCTTAAAA
GAGACACTTT TGAAATGA
|
|---|
| Protein sequence | MRSSDIRKKF IDYFVSKDHL HLPSASLVPS DDPTLLFTTA GMVPFKPYFL GQGIPPKRRI
TTVQKCFRTT DIERVGITPR HLTFLEMLGN FSFGDYFKRE AIGFAYEFLT KELGIPISKL
WISVYEEDDE AYDIWNKEIG IPKERIVRLG KEDNFWGPPG PTGPCGPCSE IYYDFGPKSK
DEEDCKPGDP CDRFMEIWNL VFMAYYMDEE GKLSPLPQKN IDTGMGLERI TTVVEGVSNV
FETDLFVPII EEIRKIVKDS DSVTERLISD HIRGITFLMG DGVVPTNEGR GYVLRRLIRR
SLRRAYKHGI VKPFLYKLVP IVVDIMKDAY PDLIEKKDYI QKVLIKEEDQ FLRTLEQGLS
LLEDYFRKAP SKTVGGEFAF KLYDTYGFPI ELTKEIAEEE GFVVDVDGFN KYMEEQREKA
RASMEAKLEE SFISLSDDEV YLMKSLPKSE FVGYEVLESE SKVLFFIGGK HGKKISNGEE
VYFLMDKTPF YPEGGGQVSD TGKVYNSEVE VMVLEVKRLG EDFIIHRGKV LKGEFEEGQI
VRAEVDKEKR YHTMRHHTAT HLLHAALREY LGTHVMQSGS LVSPEFLRFD FTHHSPLTYE
DLKIIERKVN ENILANHKVE KFWTNLEEAK RMGAIALFTE KYQKNVRIIK INNVSMELCG
GTHVDCTGEI GSFYIVKEEG IGSGIRRIFA VCGLKAWEFQ KRREEILNKI SFVLKSSPDE
IYVKLEKLID EMKEKEKKIK DLEERIIEKE LEVLANKIEN WGEFSFICTY VDMENEAIKK
LGDHLKSKND NLIMVFFKPS DNKLLGTIMV SKKVNLKGIT AKKIVEIIGE RFNGKGGGKD
TLAQISLPKT DIEDIKRALK ETLLK
|
|---|
| |