| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0896 |
|---|
| Symbol | |
|---|
| ID | 7082853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 927494 |
|---|
| End bp | 929554 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643457974 |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_002352791 |
|---|
| Protein GI | 217967285 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.252136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAG GCATATATTT TTCTTTGGGG ATTCACAATC ATCAACCTGT AGGGAATTTT
GATTTTGTAA TTGAAAAGGC TTATGAGATG AGTTATAAGC CTCTTATTGA TTTCTTTTTT
AAATATCCTG ACTTTCCTAT AAATGTTCAT TTTTCGGGTT TTTTATTACT TTGGCTTGAA
AGGAATCATC CCGAATACTT TGAAAAATTA AAGATCATGG CAGAGAGAGG ACAGGTTGAA
TTTGTAAGCG GGGGCTTTTA TGAACCAATC TTGCCTATAA TACCTGATAA AGATAAGGTG
CAACAAATAA TAAAGCTAAA TAAATACATA TATGATAAAT TTGGACAAAA TCCTAAAGGA
ATGTGGCTTG CCGAAAGGGT ATGGGAACCT CATCTTGTTA AATACATTGC AGAGGCAGGT
ATAGAGTATG TGGTAGTAGA TGATGCCCAT TTCTTTTCCG TAGGATTAAA AGAAGAAGAT
CTTTTTGGGT ATTATCTAAT GGAAGAACAA GGATATAAGC TTGCTGTATT TCCTATAAGT
ATGAAGTTGC GTTATTTAAT ACCTTTTGCT AACCCTGAAG AAACCATTAC TTATCTTAAT
AAATTTGCCT CGGAAGATAA AAGTAAAATT GCCCTTCTTT TTGATGATGG AGAGAAATTT
GGATTATGGC CTGATACTTA TAAGACAGTA TATGAGGATG GATGGTTAGA AAGATTTGTG
AATAAAATAA AAGAAAATTT TTTATTAGTA ACACCTGTTA ATTTGTATAC CTATATGAAG
AAGGTGAAGC CAAAGGGAAG AATATATCTT CCTACAGCTT CTTATAGAGA GATGATGGAA
TGGGTTTTAT TTCCTGAAGC TCAAAAAGAC CTTGAGGATC TTATGGAAAA ACTTAAAAGT
GAAAGCTTAT GGGATAAGTT TTCTCCTTAT GTAAAGGGCG GATTTTGGAG AAACTTCCTT
GCTAAGTACG ATGAATCTAA TCATATGCAG AAGAAGATGC TCTATGTATG GAGTAAAGTT
CAAAACTATC CTGATGGGGA GATTAAAGAT AAGGCTGAAG AAGAAGTCTT TCAGGGACAG
GCAAATGATG CATATTGGCA TGGTATTTTT GGAGGGCTTT ATCTTCCTCA CTTAAGGACT
GCCATATACG AACATTTGAT TAAAGCAGAA AATTATATTG AAAATTATGA CCTGCATTAT
AAGATTTTTG ACTTGGATTG TGATGGAAAT GATGAGTTAA TTCTTGAATC TCCTACTTTT
AATTTGTATC TCTCTCCTAT GCATGGAGGA TCACTCCTTG AATGGGATTT TAGACCTAAA
GCTTTCAATC TAACTAATAC TTTAACTAGA AGAAAAGAAG CATATCATTC TAAATTATCT
CAGGTAAGCT CTGATGTTCA AGGAAAGAGT ATACATGAAA GATGGAGTAC AAAAGAGGAG
GGCTTAGAAA AAATACTCTT TTATGATAAC CATAGAAGGG TTTCTTTTAT TGAGAGAATT
TTTAAAAAAG AGCCTACCCT TGAAGATTTA TGGAAGAATA GCTTAAAAGC CGAAGTTGAC
AGTTTTTATA AAGAATACGA ATATGAAATA AGTAAAGATG AGAAGAAAAT CGTAGTATCT
TTTAAAGGAG ATTATAAAGA TTTTGAAATC CATAAAAGAT ATCTTCTTTA TAAGAATGAG
CCTTTTATTG ATGTGGTTTA TGAAATTAAA AATATCTCCA AAGAACCTAT AACTTTAAAC
TTTGGATGGG AGATAAATAT TAACTTTTTA GCACCAAATC ATCCTGATTA CTACTTTTTA
ATAAGAGATC AAAAATATCC TCTCTCTTCT TTTGGAGTTG AAAAAGTTAA TAATTGGAAA
GTATTTTCGG GTATAGGAAT AGAATTGGAA TGTTCTTTAG ATATGGAAAC TATTTTGTAT
AGATATCCTA TAGAAACGGT GTCTCTTTCT GAGGAAGGAT TTGAAAAAGT TTATCAAGGA
AGTGCTCTCC TTCATTTTTA TAAGATAGAT TTGCCCATTG ACTTTAACTG GAAGACCTCA
ATAAGATTTT TAGTTAAATA G
|
|---|
| Protein sequence | MEKGIYFSLG IHNHQPVGNF DFVIEKAYEM SYKPLIDFFF KYPDFPINVH FSGFLLLWLE
RNHPEYFEKL KIMAERGQVE FVSGGFYEPI LPIIPDKDKV QQIIKLNKYI YDKFGQNPKG
MWLAERVWEP HLVKYIAEAG IEYVVVDDAH FFSVGLKEED LFGYYLMEEQ GYKLAVFPIS
MKLRYLIPFA NPEETITYLN KFASEDKSKI ALLFDDGEKF GLWPDTYKTV YEDGWLERFV
NKIKENFLLV TPVNLYTYMK KVKPKGRIYL PTASYREMME WVLFPEAQKD LEDLMEKLKS
ESLWDKFSPY VKGGFWRNFL AKYDESNHMQ KKMLYVWSKV QNYPDGEIKD KAEEEVFQGQ
ANDAYWHGIF GGLYLPHLRT AIYEHLIKAE NYIENYDLHY KIFDLDCDGN DELILESPTF
NLYLSPMHGG SLLEWDFRPK AFNLTNTLTR RKEAYHSKLS QVSSDVQGKS IHERWSTKEE
GLEKILFYDN HRRVSFIERI FKKEPTLEDL WKNSLKAEVD SFYKEYEYEI SKDEKKIVVS
FKGDYKDFEI HKRYLLYKNE PFIDVVYEIK NISKEPITLN FGWEININFL APNHPDYYFL
IRDQKYPLSS FGVEKVNNWK VFSGIGIELE CSLDMETILY RYPIETVSLS EEGFEKVYQG
SALLHFYKID LPIDFNWKTS IRFLVK
|
|---|
| |