Gene Dtur_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0876 
Symbol 
ID7082831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp904669 
End bp905376 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content31% 
IMG OID643457952 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG subfamily 
Protein accessionYP_002352771 
Protein GI217967265 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGGC CTGCTTTAGA CCTTTGGTTG AAATATAAAG AGACAGGAGA TAAAAAATTT 
CTTGAGGAGC TTCTTAATGT TTTTGATGAT TTAATACACT ACTGGGCTTC AAAATTTACT
TCTTATGGAG AACCTCTGGA AGATTTGATA CAAATTGGAT ATTTGGGATT TTTAAAAGCT
ATTGAGAATT ATGATCCTAA AAAAGGAGAA CTTTCTACAT ACATCTCTCA CTATGTATTA
GGAGAGATAA GACATCATTT GAGGGATAAG ATAGATAAAA TAAAAATTCC AAGAAGTGTA
AAGATCTTAA TAAATAAAAT GGATAATTTT ATAAAAGAAG TATGGGAAAA GGAAAATAGA
TCACCCTCTT GTGAGGAGAT TGCAAAGCAT TTAAATATTA CTGTGGAATC AGTAGATGAA
CTTTTTAAAA TTAAAGAAGC TATGATGACA GTGTCTATTG AGGATTTAGA GATTGAGGTG
GATAGGATAA GAACTGAGAG ATTAGAATCT TTTAAACTTC CTATTGAGGA GAAGATTGCT
TTAGAACAGG CAATATCAAA GCTTCCCGAA ATACAGAAAA AAATAATTGA ATATATTTTC
TACCAAGATC TAACCCAAAC TGAGGTTGCT AAAATATTGA AAATTTCTCA AACTCAAGTC
TCAAGGCTTT TGAAAAGTGC CTTAGAGAAA TTGAGAGAGA TGCTTTAG
 
Protein sequence
MIRPALDLWL KYKETGDKKF LEELLNVFDD LIHYWASKFT SYGEPLEDLI QIGYLGFLKA 
IENYDPKKGE LSTYISHYVL GEIRHHLRDK IDKIKIPRSV KILINKMDNF IKEVWEKENR
SPSCEEIAKH LNITVESVDE LFKIKEAMMT VSIEDLEIEV DRIRTERLES FKLPIEEKIA
LEQAISKLPE IQKKIIEYIF YQDLTQTEVA KILKISQTQV SRLLKSALEK LREML