Gene Dtur_0714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0714 
Symbol 
ID7083376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp724545 
End bp726890 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content31% 
IMG OID643457787 
ProductO-antigen polymerase 
Protein accessionYP_002352613 
Protein GI217967107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase
[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID[TIGR00947] probable bicarbonate transporter, IctB family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGGT TAATGCAGGT TTGGAAAGAG AGTTTAATAT TTAAGGTTCT AAATTTATTA 
GAAGATAAGA TAAAAACCAA GCTTGAGCCT ATTATTTCTA CATCCTTCTT TTTTCCTTTC
TTTCATCTGG TTTTAGAATA TTATCTTTAC ATTTTCCTTT TTTTGCTTCC TTTTTTATCC
TCAGGAAAGA TTGCTGTTGG AATTTTTATA GCTTTTATTT TATGGGTTGT TGATACCTTT
TTGGCTAAGG ATAGAAAATT TTTTGAAAGT CTTGATACTT TTACTTTGCT TTATATTTTA
TTCATGTTGA TAAATCTTGT GGCTACGTTC TTTTCCCCCT ATTTGATGCC TGCCATAAAG
GGTTATTTAA AATTCTGTGT TTATTTTGGA ATATTCTTAG TCTTCAGAGA TGTATTTAAA
AATAAAGAGA AGGTTAAAAG AGCTATTTTT GCTATACTTT TTTCTACCTT TTTATTGTCC
CTATATTGTC TTTATCAGTG GATAATAAAA GTTCCCCCTC TTGCAGGTTG GGAAGATGTG
GAGTTTGTTG GTGAGAATGT AACAAGGGTT TATGGGACCC TTCAAAATCC AAATCTTCTT
GGAGGATATT TAATTGGCAT TTTTCCTTTT ATCCTTTCTT CCATCTTTAT TTTTAGATTC
AAAAGTATTC CTCTTCTTGC AAGTTTACTT TCTTTCCTTT CTATAATTTG GACTTATTCA
AGAGGAGCCT ATTTTGGCTT CTTTGTTTCT TTGATTTTGT ATTTTTATTT CGTTATTCAT
ATGATTTGGG GATTTGCAAA TAGGAGACAG AGGAAAATTT TATTAACCTT CATTATAGCT
TTAGTATTCT TAGGAGTGGG AATTTTCTTA AAATCTTCTT ATCTTCAAAA AAGGATATTC
TCAATTTTTA CCCTTTGGGG ACATTCCTCT AATGCTACAA GGATAGTTAT ATGGGAAAGA
TCTTTTAAGA TATTTAAGGA CTTTTTCTTA ACAGGAATTG GGCTTGGAAA TGATGTTTTT
AGGAGAGTTT ATGCCTTTTA TATGGAGCCT AAATTTACTG CTCTTGCATC TTACAATCTT
TTTATGGAAA TAGGAATCGA AGGAGGAATA TTTGCTCTTA TAGTATTTCT TCTGATGCTA
TATTATCTCT TTAGTAGGTT TATTAAAAGG TATGATTCAT GGGATATGGA ACAAAAGTTA
ATTGGGATAA CTTCATTATC ATCAGTTGTT GCTCCCATTT TCCATGGTTT TGTAGACACT
ATTTGGTATA GACCTTATCC TCAAATTATT TTTTGGTTTT CTGTTAGTAT ACTTGTGAAT
TTATATAAAG ATAAAAAGGA ATCGAAAATA CTGCTTTTTA ACTTAGGAGG ATTAGGTGAT
CAAATACTTT TTCTTCCTGT GATAAAAGCT CTTAAAGAAA AGCTTAATCC TAAAATAACT
ATAATTACAG AGAGAAGAGG TAGAAAAATT TATGATCTTT TGAAAATGGA TGTAATAGAA
TTTAATCCTA AGGAAAATTT TTCATTAAAA GATACAGTGT ATCTTTTAAC AAAACTTCAT
AGAGAAAATT ATGATATCTC AATTTCTACG GGAAAGTCCC TCTTTATACC TATTTTTATG
TATCTTGTAG GAGCACCTAT AAGGGCAGGA TATAAAGAGA ATCCTTTGAG CTTTTTGTAT
ACTCATAAGG CTTCTTCAAA GAGAAATGAA TATATGGCAA GGGTTCATTT CAGGCTTGTG
GAGGCAATCT TTAAAGATGC TTCTTATGCT AATCCTGAAA TAGAACTTTC AGAAGGTATA
AAAGATGAGG TCGAAAGGAG AATTATAGAA TATGGATTGA AGCCTTTTGA ATATACGCTT
TTGCATCCTG GTGTAAGTAA GATGAGTATT AAAAGGGGTA TAGATAGAAG ATGGTCTGAG
GAAAATTGGG TAGAGTTAAT AAAGAGATTA AAAGAGCACA ATATAGATTA TGTGATTATT
TATGGACCCG ATGAAGAAGA TAGTATAAGG GAATTAAAGG AAAAAGTTCC TGATGGCAAA
TTTGTTTCTC CCAAGTCCTT AGAGGAATTC TTAGGATGGA TATATTATTC AAAAGTCATG
GTTTGTTTAG ACTCTGCTCC TCTTCATCTT GGTGTTGCTC TCAAAAAACC TATTGTGGCT
CTTTTTGGTC CTACAAATCC TGCTGAGATC TTGCCTATAG ATCCCATTTA TCAAGTGGCA
AAGATTGATC TTCCTTGTGA GCCTTGTCTT TGGGATAAAA GAAAAAGGGT TTGCGAATCT
TTAGATTGTA TGAAAATACC CGTGGATTTG GTATGGGAAA AATTAATGAT CTTTGTAAAG
AGCTAA
 
Protein sequence
MDRLMQVWKE SLIFKVLNLL EDKIKTKLEP IISTSFFFPF FHLVLEYYLY IFLFLLPFLS 
SGKIAVGIFI AFILWVVDTF LAKDRKFFES LDTFTLLYIL FMLINLVATF FSPYLMPAIK
GYLKFCVYFG IFLVFRDVFK NKEKVKRAIF AILFSTFLLS LYCLYQWIIK VPPLAGWEDV
EFVGENVTRV YGTLQNPNLL GGYLIGIFPF ILSSIFIFRF KSIPLLASLL SFLSIIWTYS
RGAYFGFFVS LILYFYFVIH MIWGFANRRQ RKILLTFIIA LVFLGVGIFL KSSYLQKRIF
SIFTLWGHSS NATRIVIWER SFKIFKDFFL TGIGLGNDVF RRVYAFYMEP KFTALASYNL
FMEIGIEGGI FALIVFLLML YYLFSRFIKR YDSWDMEQKL IGITSLSSVV APIFHGFVDT
IWYRPYPQII FWFSVSILVN LYKDKKESKI LLFNLGGLGD QILFLPVIKA LKEKLNPKIT
IITERRGRKI YDLLKMDVIE FNPKENFSLK DTVYLLTKLH RENYDISIST GKSLFIPIFM
YLVGAPIRAG YKENPLSFLY THKASSKRNE YMARVHFRLV EAIFKDASYA NPEIELSEGI
KDEVERRIIE YGLKPFEYTL LHPGVSKMSI KRGIDRRWSE ENWVELIKRL KEHNIDYVII
YGPDEEDSIR ELKEKVPDGK FVSPKSLEEF LGWIYYSKVM VCLDSAPLHL GVALKKPIVA
LFGPTNPAEI LPIDPIYQVA KIDLPCEPCL WDKRKRVCES LDCMKIPVDL VWEKLMIFVK
S