Gene Dtur_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0675 
Symbol 
ID7083337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp684700 
End bp687828 
Gene Length3129 bp 
Protein Length1042 aa 
Translation table11 
GC content35% 
IMG OID643457748 
Productglycoside hydrolase family 57 
Protein accessionYP_002352574 
Protein GI217967068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1449] Alpha-amylase/alpha-mannosidase
[COG4945] Membrane-anchored protein predicted to be involved in regulation of amylopullulanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA TTTTAGCTTT TTCTCTACTC TTTATTATAA TTTCCCTAAT CTCCTTAAGC 
TTTTCCCAAG ACATTCCTTT AAATATCTAT GATCCAAAGG TACAAAAAGT AGAAAGACCA
TTATACTTAG CCATTATATG GCATAACCAC CAGCCTTTAT ATTATGATCC AGATCAAAAT
ATAAATATCC TTCCTTGGGT AAGGATGCAT GCAATAAAAG ATTACTATGA CATGGCATAC
ATATTAAAAA ACTATCCCCA AATAAAAGCT AATTTTAACA TGGTTCCATC TCTCTTATAT
CAATTAGAAC TTTATACCAA GAAGGGCATA AAGGATAAAT ATCTAATTCT CACAGAAAAA
CCTGCAGATC AACTTACCAT TGAAGATAAA GAATTTATAT TAAGAAGATT CTTTGACGTT
AATTGGGATA GAATAATCAA AAAATTCCCA AGATATTGGG AACTTTTGAA TAAAAGAGGC
CAATCTGTTG ACGATGTGGT AATAGCAAAA GCAATTCAGA AATTTACAAC TCAAGATTTT
AGAGATCTAC AAGTATGGTT CAATTTAGCA TGGTTTGATC CTGATTTTCA AAAGTATGAC
AAAGATCTAT CAAGACTTAT AGAAAAAGGT AAAAACTTTA CTGAAGAAGA TAAAAAAGTG
GTAATAAACA AACAATATGA AATTATGTCT AAGATTATTC CTCTTTATGC GGAACTACAA
AAAACCAAAC AAATAGAAGT AACTACTACT CCATTTTTCC ATCCAATAAT GCCATTATTA
GTGGACATAA AATCTGCCAA AATTGCAGTA CAAGACATAG CTCTACCTAA TGCCACAATA
AACTACAGTG ATGATACATC AGCTCAACTT TCAATGGCTG TTAACTACTA TAAAAAATTT
TTCAAAGATA CACCAAAGGG TCTTTGGCCT TCCGAAGGAT CCGTAAGCCA AGACATTATT
CCCATCGTAG GAAATTCAGG CTTTTTATGG ATGGCAAGTG ATGAGGATGT GCTTTCAAAA
TCTCTAAACA CTCCTATCCT CAGAGACTCA AGAGGAAATG TAACGAATCC TGATGTACTT
TATCAACCTT ACATAGTGGA AGAACAAGGT AAAAAGGTTT ATGTGGTGTT TAGAGACAAA
AATCTTTCAG ATAAAATTGG TTTTGTCTAT AGTGGAATGA AAGGAGAAAA TGCAGCAAAA
GACTTTGTAA ACCGCTTAGA GAATATCTAT GAGAGAGTAA AGGATGACAA AAAGTCATAT
CTCGTAACAG TAATACTTGA CGGTGAAAAC TGTTGGGAAT ATTATGAAAA CGATGGAAAG
GAATTTTTAA ACACTCTTTA TAAATTACTC ACAGACAGTC CTTATATTGA AACAGTAAGG
CTAACAGACT ACTTAAATAA ATTCCCTCCC ACTAAGAAGA TAGAAAGGCT CCATTCAGGA
TCTTGGATAG ATGGCACTTT CTTAACTTGG GTAGGAGAAC AAGAAGAAAA CAAAGCATGG
GAAATCTTAG ATAAAGCAAG GACAGAGTTA ATATATGAAA CAGTGAAACA GAAGAAAACT
ATATCTCCCG TATTAAATCC AGATCTCTTA AGAAACAATA TCGAAAAAGC ATGGTTTGAA
CTATATGCAG CAGAAGGTAG TGACTGGTTC TGGTGGTATG GAGATGATCA AGACTCCACA
AATGACCTTG CCTTTGATGA ACTCTTTAGG AAACATCTTA TAAATGTCTA CAAATTAATT
GGTAAAGAAG TTCCTCAAGA ATTGTTCCTT CCTATAGTAA AAATAGGTGA AGAAAAACCA
GTACAAAGCT TACAAGCAAA ATTCACACCT AAGATTGATG GACTGATTAA TCCCGAAGAC
GAATGGAAGA ACGCTGCAAT CTACCTTGCT AAAAAAGGAA CAGGACTTTC CACAAAGCCA
AGTGATTTTA TTGAAAAAGT ATACTTAGGT CTTGACAATG ATAATGTATA CTTTCTTATA
GAGTCAAAAA CAAATCTCAA AGACTATTTA GGAAAGCCTT ATTTCTTAGC AGTGTACTTT
TCTAATCCAA ACCAAAAGGA ATATAATTTG TATCCAAGAA AGGGAAGTCA GACTCTCGGG
TATGGAATAG CTTACGAACT TCTAATTGAT TTTTCAAAGA TCAGCTCCCT TGGAGAAGTA
GATGCCATAT TAAATCAAGC TACTGGTAAT AATTCCTGGA GACAACAATC TACACTAAAA
GCAGGAGTAT CGGAGAAATA CATAGAAGTA GGCGTACCTT TCAAGGAAAT TAAAGTACAA
GGAAGAGAAC AAATAGCAAT GAATGTGATA TTTGGGAAAG AAGAACCGAT AGATGTGGTA
CCTTACTATG TTCCTATTTA CTTAACTGTT CCTGAGAAGA AGTTAGAAAT AACATACTTC
TCTATTGATG ATCCAACTGG GGATGACTAT GGATGGGGCA AAGTTGTATA TCCAACAGCT
CCAGTATTTA AACCCGGTGT TTTCGACATA ATCCATGTAG AAATGGGTAA AAGCAAAGAT
GATATTGTAT TCAAAATTAA GATTAGAGGA GATTTAGAAA ATCCATGGGG TTCGCCCACA
GGAGTCTCAG TTCAAACCAT AGACATATAT ATTAATGATG GAAAAGAGAG CACCTATTAC
TATCAAGCCT TACCTGGAAG ACAAGCTAAT ATTCCTGAGG GTTGGAACAA AGCAATTTGG
GCTGAAGGAT GGATACAAGA ATTAATAATT CCTACATTAG ATGAGAAAGG AAAAGTACAA
CTAAAAGAGA TAAAAGGAGT AGTACAATTA AGCACCGATC CTACAGAAAG AACTATAATA
ATCTCAGTAC CTGAAAAATA CTTAGGTCCT GTAACACCTG ACTGGAAAAT CCTCGTGATA
TTATGTGGAC AAGAAGGATA CCCAAGACCT GGAAGCTGGA GAGTAAGAGA AGTAGAAGAA
GAAGCTAAAC AATGGAGATT TGGCGGTGGG GACGACTTCT ACGGCGATCC TAATATCATA
GATATGATTG TTCCCCCTGG AATGAAACAA GAGGATATAC TGTCTAAATG GGTAAGTAGT
GAAGATGAGG AAGAAAATGT TTATGTAGAA TTACCCTTGA TCCCCCTTAG GGTTTTAATG
TCTCAATAA
 
Protein sequence
MKRILAFSLL FIIISLISLS FSQDIPLNIY DPKVQKVERP LYLAIIWHNH QPLYYDPDQN 
INILPWVRMH AIKDYYDMAY ILKNYPQIKA NFNMVPSLLY QLELYTKKGI KDKYLILTEK
PADQLTIEDK EFILRRFFDV NWDRIIKKFP RYWELLNKRG QSVDDVVIAK AIQKFTTQDF
RDLQVWFNLA WFDPDFQKYD KDLSRLIEKG KNFTEEDKKV VINKQYEIMS KIIPLYAELQ
KTKQIEVTTT PFFHPIMPLL VDIKSAKIAV QDIALPNATI NYSDDTSAQL SMAVNYYKKF
FKDTPKGLWP SEGSVSQDII PIVGNSGFLW MASDEDVLSK SLNTPILRDS RGNVTNPDVL
YQPYIVEEQG KKVYVVFRDK NLSDKIGFVY SGMKGENAAK DFVNRLENIY ERVKDDKKSY
LVTVILDGEN CWEYYENDGK EFLNTLYKLL TDSPYIETVR LTDYLNKFPP TKKIERLHSG
SWIDGTFLTW VGEQEENKAW EILDKARTEL IYETVKQKKT ISPVLNPDLL RNNIEKAWFE
LYAAEGSDWF WWYGDDQDST NDLAFDELFR KHLINVYKLI GKEVPQELFL PIVKIGEEKP
VQSLQAKFTP KIDGLINPED EWKNAAIYLA KKGTGLSTKP SDFIEKVYLG LDNDNVYFLI
ESKTNLKDYL GKPYFLAVYF SNPNQKEYNL YPRKGSQTLG YGIAYELLID FSKISSLGEV
DAILNQATGN NSWRQQSTLK AGVSEKYIEV GVPFKEIKVQ GREQIAMNVI FGKEEPIDVV
PYYVPIYLTV PEKKLEITYF SIDDPTGDDY GWGKVVYPTA PVFKPGVFDI IHVEMGKSKD
DIVFKIKIRG DLENPWGSPT GVSVQTIDIY INDGKESTYY YQALPGRQAN IPEGWNKAIW
AEGWIQELII PTLDEKGKVQ LKEIKGVVQL STDPTERTII ISVPEKYLGP VTPDWKILVI
LCGQEGYPRP GSWRVREVEE EAKQWRFGGG DDFYGDPNII DMIVPPGMKQ EDILSKWVSS
EDEEENVYVE LPLIPLRVLM SQ