Gene Dtur_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0625 
Symbol 
ID7081665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand- 
Start bp628023 
End bp628793 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content33% 
IMG OID643457701 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_002352527 
Protein GI217967021 
COG category[L] Replication, recombination and repair 
COG ID[COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAATAA AAATAACATA TGAGACTCTT GACGGAGATA TAGTACTTCC TAAGCACTAT 
AATCATCATA TCCAGGCTCT TATTTACAAA ACCTTCTCCC CGCAGCTTGC CACAAATCTT 
CACAATATTG GTTTTCCATA TGGGAAAAGA AGATTTAAGC TTTTTACCTT CTCTCGTATC 
CTTGAGAAGG GTATCCCTAC TAAGGATGAC ACAAAATTAA TCTTTAAAAG GAAAATTACA 
TTCTATTTTT CTTCCCCAAT AGAAGATATT GTTGAAAATC TTGCAGAAAG AAGCTTTAAA 
GAGAGAGAAT TTGAACTTTG TGGAAAGAAA ATATACATAT CTCAACTTCA AATAATCACA 
ACTCCTAAAA TTGAAGAAAA AGTAAAAATA AAAGCCATAT CTCCTATCAC CATATATAGT 
ACATTAAAGA AGGCGGATGG AAGCAAAATT GTACATTTTT ACAAGCCCAT AGATAAAGAA 
TTTTCCAAAC TAATAGAAAA TAATGCTAAA AAGAAATTTC ACCTAATATA TGGAAAAGAC 
CCAGAGGAAC TAAAGTTAGA AATAAAACCC CTGAAGTTTT CTGTAAAAGA TAATTTAAAA 
CTTGTTAAAT TTAAAGACAC AATAATTGAG GGATATACCG GAGTATATGA GCTTACTGGA 
AGTCCTGAAT TAATCTACGT AACCTACGAG GCAGGATTGG GAAACAAAAA CTCAGGAGGA 
TTTGGTATGT GGGAAATATG GAGAGAAAAG GAGGAGGATG AAAATGCTTG A
 
Protein sequence
MRIKITYETL DGDIVLPKHY NHHIQALIYK TFSPQLATNL HNIGFPYGKR RFKLFTFSRI 
LEKGIPTKDD TKLIFKRKIT FYFSSPIEDI VENLAERSFK EREFELCGKK IYISQLQIIT 
TPKIEEKVKI KAISPITIYS TLKKADGSKI VHFYKPIDKE FSKLIENNAK KKFHLIYGKD 
PEELKLEIKP LKFSVKDNLK LVKFKDTIIE GYTGVYELTG SPELIYVTYE AGLGNKNSGG 
FGMWEIWREK EEDENA