| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0610 |
|---|
| Symbol | |
|---|
| ID | 7081650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 610962 |
|---|
| End bp | 611711 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643457686 |
|---|
| Product | CRISPR-associated RAMP protein, Csm3 family |
|---|
| Protein accession | YP_002352512 |
|---|
| Protein GI | 217967006 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATAAAT TCATAGGCAA AATATTTATT GAGGGAGAAA TTGTCCTTGT TACAGGACTT
CATATCGGAG GCTCTAAGGA AACAGGAGAA ATAGGTGGAC TTGATAATCC TGTAATAAAA
ACGGTAGAAG GCATACCCTA TATACCTGGC TCATCCCTAA AGGGGAAAAT AAGAAGTTTA
CTTGAAAGAA CCTATGATAT TAAACCTCCT AAAGAACCAG GAGAACCATG TGGATGTGGA
GAATGCGAAA TTTGCCAACT TTTTGGCTCT CATTCCACAG AAAATAAAAC CATTTCAAGA
CTTATTATTA GAGATTCCTT TTTAGATGAG GAGGATTTTC AACAAAAATT TGGAAATGCT
CTTGAAGGAG GATATACTGA AGAAAAAGTA GAAAACATTA TAGACAGAAT AAAGGGAACA
GCAAAGGATC CAAGAATTAT GGAAAGGGTT CCTGCGGGAG CAAAGTTTAA ATTTTCTTCC
GCTATAAGCA TATACGAAAA GGATGATATC CAAAAACTTC TTATGACCTT TGTAGAGGGC
ATGAGAATGT TGGAAGATGA TTATCTTGGT GGAAGTGGAA CAAGGGGATA TGGACAAGTA
AGATTTGAAA ATTTAAATAT TTCTATCAAA AGTATTAAAG ACTATTTAGG GGATAACACT
AAAAAGACTA TTATAGAGGG CAAAGCTTTA AGCGAAATAA AGATGGAAGA TTTAACCAAT
AAAATTGAAG ATAAGTTATC GAATAAATAA
|
|---|
| Protein sequence | MDKFIGKIFI EGEIVLVTGL HIGGSKETGE IGGLDNPVIK TVEGIPYIPG SSLKGKIRSL
LERTYDIKPP KEPGEPCGCG ECEICQLFGS HSTENKTISR LIIRDSFLDE EDFQQKFGNA
LEGGYTEEKV ENIIDRIKGT AKDPRIMERV PAGAKFKFSS AISIYEKDDI QKLLMTFVEG
MRMLEDDYLG GSGTRGYGQV RFENLNISIK SIKDYLGDNT KKTIIEGKAL SEIKMEDLTN
KIEDKLSNK
|
|---|
| |