| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0559 |
|---|
| Symbol | |
|---|
| ID | 7083221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 558136 |
|---|
| End bp | 560010 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643457637 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002352463 |
|---|
| Protein GI | 217966957 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG3411] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.382532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGGA GTATGGATGA AGCTATTCGG TATATTGAAG AAAAGAAGAT TGAAAGAAAA
AAGAAATTAG AAGATCTTAA TATTTATGTA TGTGTGGGAA CGGGTTGTGC TGCAAAGGGA
TCAATAAAGG TCTATGAAGA ATTAAGGAGG ATTTTTAAAG AAAATAATGT AAAGGCTAAT
TTACAGAAAT TGGAAGAAAA GGAAGAAAGG GTTAGAAAAA CAGGGTGTTG TGGTAGATGC
TCTTCAGGAC CTTGGGTAAT AGTTATGCCT TATGGATATT TTTACTCCGA GGTAAAGCCT
GAGGATGTAA AGGAGATTTA TGAGGAGACA ATACTCAAAG GCAGACCTGT GGAAAGACTT
CTTTTTACAG ATCCTGCAAC AGGTGAAAGA GTAGAAAGGC TTGAGGATGC AAAATTCTAT
AAAGTTCAAT CCTTCTATAT TATGGAGGAT ATAGGAAAGT GTGAATGCGA TAGTATTGAT
GACTACATGG GAAGGGGAGG ATATCTATCC TTTATTAAAG TCCTCAAAGA GGGAAATCCT
GATAATGTTA TAAAAACCAT TAAAGATTCT GGACTTCGTG GAAGAGGTGG AGCAGGATTT
CCCACAGGAG TAAAGTGGGA GATAACCAAA AACAGTAGGG GAGATAAAAA ATTTGTGGTA
TGTAATGGAG ATGAGGGAGA TCCTGGAGCC TTTATGAATA GGACTCTTTT AGAAAGGGAT
CCCCATGCAG TATTAGAAGG GATGCTTATT GCAGCATATA CTATTGGGGC TCAAAAGGGT
TATGCCTATA TTAGAGCGGA ATATCCTGTA GCGGTAGAGA TGTTCCGAAA GGCTATAGAG
GATGCAAAGA GATTAGGACT TATAGGAGAA AATATTTTAG GAACTGGTTT TTCTTTTGAT
ATAGAGATAA AAGAGGGAGC GGGAGCTTTT GTATGCGGAG AAGAAACCGC CCTTCTTGCC
TCTATTGAGG GAAAAAGAGG AGTTCCTCGT CCTCGTCCAC CCTATCCTGC TCAGGCAGGT
CTTTGGGGGT ATCCAACCCT TATAAATAAT GTGGAGACTT ATGCCAATGT ACCTAAGATC
ATAAGAGATG GGGCTGAAAA TTATAGAAAA AGAGGAGTTC CTAACTCTCC TGGCACTAAG
ATGTTCTCAG TGACAGGTCC AGTAAAACTT ACTGGAATAA TAGAAGTGGA GTTTGGGACT
ACCTTAAGAC AGATTGTGTA TGAGATATGT GGGGGTCTTA CTGGAGACAA TGAGTTTAAA
GCAGTGCAAA TAGGTGGACC TTCAGGGGCA TGTCTTTCGG AAGCTTTTCT TGATTTGCCT
TTGGATTATG ACTCTTTAAA ATCTGCTGGA GCTATGGTAG GTTCTGGAGG TATTGTGGTT
CTATCAAAGA AAGCCTGTAT GGTTGAGGTG GCAAGATTTT TCCTTGATTT TACCAAGAGA
GAATCCTGTG GTAAGTGTAT TCCATGTCGT GAGGGTTTGA TGCAAGCTTA TCGTATCCTT
GAGAGATTCA CACAAGGCAA AGGAACCTAT GAGGATTTAG AGAATCTGGA ATTTCTTGCA
GGTCTTATAA AAACTGCTTC TGCTTGTGGG CTCGGGCAAA CAGCTCCAAA TCCTATATTA
AGTACATTAA GACTGTTTAG AGATGAATAT ATTGCTCACA TCGAAGGGAT ATGTCCTAGT
GGAATGTGCA CTGCCTTTAA GAGATATGTT ATAAATCCTG AGCTTTGTAA AGGATGTGGG
CTTTGTGCGA GATTCTGTCC TCAAAATGCC ATCTCTGGTG AAAGAGGAAA ACCTTATGTG
ATTGACCAAG AAAAGTGTGC TAAATGTGGA GTTTGTGTTG AAAAATGTAA ATTTAAAGCC
ATTGAAATTA GGTAA
|
|---|
| Protein sequence | MLRSMDEAIR YIEEKKIERK KKLEDLNIYV CVGTGCAAKG SIKVYEELRR IFKENNVKAN
LQKLEEKEER VRKTGCCGRC SSGPWVIVMP YGYFYSEVKP EDVKEIYEET ILKGRPVERL
LFTDPATGER VERLEDAKFY KVQSFYIMED IGKCECDSID DYMGRGGYLS FIKVLKEGNP
DNVIKTIKDS GLRGRGGAGF PTGVKWEITK NSRGDKKFVV CNGDEGDPGA FMNRTLLERD
PHAVLEGMLI AAYTIGAQKG YAYIRAEYPV AVEMFRKAIE DAKRLGLIGE NILGTGFSFD
IEIKEGAGAF VCGEETALLA SIEGKRGVPR PRPPYPAQAG LWGYPTLINN VETYANVPKI
IRDGAENYRK RGVPNSPGTK MFSVTGPVKL TGIIEVEFGT TLRQIVYEIC GGLTGDNEFK
AVQIGGPSGA CLSEAFLDLP LDYDSLKSAG AMVGSGGIVV LSKKACMVEV ARFFLDFTKR
ESCGKCIPCR EGLMQAYRIL ERFTQGKGTY EDLENLEFLA GLIKTASACG LGQTAPNPIL
STLRLFRDEY IAHIEGICPS GMCTAFKRYV INPELCKGCG LCARFCPQNA ISGERGKPYV
IDQEKCAKCG VCVEKCKFKA IEIR
|
|---|
| |