Gene Dtur_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0556 
Symbol 
ID7083218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp554889 
End bp556517 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content34% 
IMG OID643457634 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002352460 
Protein GI217966954 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TGATTTTAAC TCAGGAGATA AGTTGTCAGT ATTGTTATAA ATGTCTTAGA 
AATTGTCCCG TTAAGTCCAT AATGTTTAAT AAAGGTAAAT CCTATGTTAT TGATGATGAA
TGTGTATTGT GTGGAGTATG TATAGAGGTA TGTCCCCAAA AGGCAAGAAC TTATGTAAAA
AGCACTCATT TATTAGAAAA CTTTAAAGGT AAACCCTTTT TAGTATCCAT TGCTCCATCT
TTTTTTGCTC ATTTTGACGA GCCTTTTAAA GTTATTACTT TTTTGAAAAA CTTTGGTGCT
GCTGTAGTAC AGGAAACGGC TGTAGGGGCA GATATAGTTT CTTACTATTA TAAAAAATTT
ATTCAGGGTA AAAATAAGAC AGTTATAACT ACTGCTTGTC CAGTTGTTTT TGAACTTGCA
GAGAAGTATT ATCCCGATGT AATTCCTTAT TTAATTCCCT TTCTTTCTCC CATGAATGCC
CATGCTCTTT TTATGAAAAA ATATTTTGGA GATTTCCCTG TAATCTATTT GGGACCTTGT
ATAGCTAAAA AACGAGATGG AGAAAACTAT GTAGACCTTG TCTTAACCTA TGAAGAACTC
TCTTTATATA TGGAGAGAAG TGGGATCAAT ATAACAGAAC TCGAGGAAAG TTTACCTACT
CCTCCATATC CTGAGAGAGG GAGAATTTAT CCTGTAAGTG GCGGGATAAA TTCAACCCTT
GATGGATCTT GGGAAAACTA CCTTGTAGTT GAGGGGATAG AAAATATCAT AAAAGTTTTT
GAAAATATCT CTTCCTATGG AGAGGGTTTT GTGATTGAAG CTTCCTCTTG TTTTGGAGGA
TGTATAAATG GTCCAGCCAT AAGAAAGGAT ATAGGAATAT TGGAGAAAAG AAAAAGGATT
CTTTCCTACA TGGAGAAGTT AAAGGAGATA AATGGGGAAA TTATAAAGCC CGAACTTATC
AACTTGGATT TAAAGAGAAA CTTTTCATCC CAGAAGAAAA TTATTGAAAT TCCAGAGGAG
AGAATAAGAA AGGTTTTAAG AGAGATGGGA AAGGATAACC CTAAGAAGGA GTTAAATTGT
GGGGCTTGTG GTTATCCAAG TTGTAGAGAT AAAGCCATAG CAGTTATTCT TGGAAAAGCA
GAAAAAGAAA TGTGTATTAC TTATCTTATT GATAAGGTAA GTTCGGTAAG CAGTGCCATA
ATTGAAGAGT TCCCTAATAT TGTCATTATA TATAAGGATG GAAAACCCAT CTATTTAAAT
CCAGCAGGAG AAGACTTCTT CTTGAATAAA GAGGCTTTAC TGGGTTTTAT TATTGATGAG
ATTGAAGAAG GGAAAAATCC CTTGGAGATA TATATAGATA ATGAAGAATA TTACTTCTTT
GTAAAAAAAT TTAACCTCCC CGATGATAAC GGAAAGGTGG CTCTCCTTCT TGATATTACT
AATGAGAAAA AGAGGGAAGA TGAACTTAAC AAATTGAAAA AGGAAAGCGC TGAAAGAATT
GAAGAGTTGA TTAATCGCCA GATGCTTCTT GCTCAGGAGA TTGCAAGTCT TCTTGGAGAA
TCTATTGCAG AAACCAAGAG TCATTTTGCC CAATTTAGGA AGGTGTTGGA AGAGGATGCT
CACCTGTGA
 
Protein sequence
MKKLILTQEI SCQYCYKCLR NCPVKSIMFN KGKSYVIDDE CVLCGVCIEV CPQKARTYVK 
STHLLENFKG KPFLVSIAPS FFAHFDEPFK VITFLKNFGA AVVQETAVGA DIVSYYYKKF
IQGKNKTVIT TACPVVFELA EKYYPDVIPY LIPFLSPMNA HALFMKKYFG DFPVIYLGPC
IAKKRDGENY VDLVLTYEEL SLYMERSGIN ITELEESLPT PPYPERGRIY PVSGGINSTL
DGSWENYLVV EGIENIIKVF ENISSYGEGF VIEASSCFGG CINGPAIRKD IGILEKRKRI
LSYMEKLKEI NGEIIKPELI NLDLKRNFSS QKKIIEIPEE RIRKVLREMG KDNPKKELNC
GACGYPSCRD KAIAVILGKA EKEMCITYLI DKVSSVSSAI IEEFPNIVII YKDGKPIYLN
PAGEDFFLNK EALLGFIIDE IEEGKNPLEI YIDNEEYYFF VKKFNLPDDN GKVALLLDIT
NEKKREDELN KLKKESAERI EELINRQMLL AQEIASLLGE SIAETKSHFA QFRKVLEEDA
HL