| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0518 |
|---|
| Symbol | |
|---|
| ID | 7083180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 522220 |
|---|
| End bp | 523377 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643457599 |
|---|
| Product | ABC transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_002352425 |
|---|
| Protein GI | 217966919 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAGA AAAGTATTCT TTTTGTGATC CTAACCATAA CTCTTTTATT TTTGATGATT
GCTAATTTAG GAGCTCAGAC TAAAAAAGTA AGACTTAGTA TTATAGATGT GGCAGGTAAT
TTACAATTAA CAAAAACAGC CATTGAAGCT TTTAAAAAAG CTCATCCCGA TTTAATCGAA
GATATCGAAT ATCTTAAAGC TACAGCTCCA GAACTTCCAG CAAAGATAAA GGCACAGCAA
ATGGCAGGAA ATGTTACAAC TACTATGGTG CTTACTGGAT ATGATGCTAT GGCTTCTGGT
CTTGAAATGG ATCTTTGGGA GAACATTTAC CCCACTTATA AACAATATTT TCCAAACTTA
GAAAGTAGAT ATTTACCTGG AGCAAAAGCT GCTTTTGATC TTTTTAAAGG TTATGGAATA
GTAGTAACCT ATTGTCCTGG TGGTCCTATG TTTACTTATA ATCCTGAGAA GGTTAAAAGG
GTTCCACAAA CTGCCGAAGA ATTACTTGAA TGGGCTAAGC AAAATCCAGG AAAGTTTATG
TATGCAAGAC CTGCTAATTC TGGACCTGGA AGAGCTTTCT TGCAGGGTTT ACCTTATATT
CTTGGAGATA AGAATCCAAA GGATCCTAAA ACTTGGGAAA AGACATGGGC ATACCTTAAA
GAGCTTGATA AATATATAGA TTATTATCCT ACAGGGACAG CTATAACTTT TAGAGAATTA
GCGGAAGGTA CAAGATGGAT TATAGCAAGC CATCTTGGTT GGGATATGAA TCAAAGAATA
TTGGGTGTGA TTCCTTCAAA TTTTAAGGCA TTTTTCTTAA AGAATACTAC TTGGGTTACA
GATGCCCACT TCATGTGTAT GCCTAAGGGG CTTGATGAGG CAAGAAAGAG AGCTACACTA
CAACTTATGT CATGGCTTTT GAGGGCTGAG ATGCAAGCAC TAACCTATGA TGATGGCTAT
TTTTATCCTG GCCCTGCAAT TAAGGGTGTA CCATTAAGTG CTGCTCCAAA GGAGACTCAG
GATAAGATAA AAGCAGCCAT GAGAACAGAG TATGAAAGGG CTATAAAGGA ATTTCCATCA
ACCACACAAC TTGGTGCAAA GGAGCTTGTA GAAGCATTTG ATATGTGGGA TAGAATGATA
GGAGCAAAGG TTAAGTAA
|
|---|
| Protein sequence | MRKKSILFVI LTITLLFLMI ANLGAQTKKV RLSIIDVAGN LQLTKTAIEA FKKAHPDLIE
DIEYLKATAP ELPAKIKAQQ MAGNVTTTMV LTGYDAMASG LEMDLWENIY PTYKQYFPNL
ESRYLPGAKA AFDLFKGYGI VVTYCPGGPM FTYNPEKVKR VPQTAEELLE WAKQNPGKFM
YARPANSGPG RAFLQGLPYI LGDKNPKDPK TWEKTWAYLK ELDKYIDYYP TGTAITFREL
AEGTRWIIAS HLGWDMNQRI LGVIPSNFKA FFLKNTTWVT DAHFMCMPKG LDEARKRATL
QLMSWLLRAE MQALTYDDGY FYPGPAIKGV PLSAAPKETQ DKIKAAMRTE YERAIKEFPS
TTQLGAKELV EAFDMWDRMI GAKVK
|
|---|
| |