Gene Dtur_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0431 
Symbol 
ID7082452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp436367 
End bp437950 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content33% 
IMG OID643457520 
ProductPectate lyase/Amb allergen 
Protein accessionYP_002352347 
Protein GI217966841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3866] Pectate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.471187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGCGGA GTAAAGTAAA ATGGATTATA TTATTGATGT TTCTATTGCA AATAGTTTCA 
GGCTGTTCCT CTAAGCAGAC TACTGATTCT ACAAACATAC CCCCAATAGC GGTGCCTACA
AATTTAAAAG CAGAAATTTT AAGTGAAAAA AGAGTATTGC TAACATGGCA GGACAATTCC
AATAACGAGG ATGGATTTAA GGTTGAAAGA AAAGAAGAGG AAAAAGATTG GATACAAATT
GCAGTTGTCG GATTCAATAC AGTAAATTAT ATAGATTCTA ACCTAACTCC CGGAAAAACT
TATTCTTACA GAGTAAGAGC ATATAATTCT TCTGTTAATA GTGATTATTC CAATGAAGTC
AGTATAACAA CTCCTTTAAT TATAGCACCA GAGCTATCTT TATCTATTGA CGAAAACAAT
CATGTTAAAT TGTATTGGAC AACGAAGTCA GAGGTAACGC AAGGTTATGT TATTGATAAA
AAAGAAGAGA ATGGAGATTG GCAAGAGCTT TTAACCTTAG ATGTATCTTC TAAGTCTTAT
ACTGATCCAG ATGTGATATC TGGAAAAGTT TATTGGTATA GAATAAAGGC CTTTAGTTCT
AACATTGAGA GTGATTATTC TGAGGCTTAC GTATATGTTC CCTTAATAAA TCCAAGTAAT
TCTCCTGACT TTTCTCTTGT AGGATTTGCT ACTTTAAATG GCGGAACTAC AGGTGGAGAA
GGCGGAACAG TAGTTTATGT GAGTACGGGT GTTGAGTTGC AAAATGAGAT AAATAAAGGT
GGTCCAAGGA TAATTTATGT AAATGGGACT ATCACACCTC AAAATAACAA TAATAAGTAT
GTTATTGAGG TAAAAAATGT TTCTAATATT TCCATTATTG GAGTTGGGAC TTATGGTGAG
TTAAATGGTG TGGGTATAAA AATTAATAAT GCTAATAATA TAGTTGTAAG AAATTTAATT
ATACATAATG TAAAAGACCC AGCTATTGCA ACGCAAGGCC CAGACTGTAT TACTATATCA
GGTCCTGCAA GAAATATCTG GATAGATCAT TGTGAATTGT ACAACCAATT CCAAGGTATT
GATAAGGATT ATTATGATGG GCTTCTTGAC ATTAACGGCG ATGTGTCCTA TGTTACTGTT
TCCTGGTGTT ATTTCCATGA TAGTTGGAAA ACCAGCCTTA TAGGATCTTC AGATACTGAT
AATTACAATA GGACTATTAC TTATCACCAT AATTGGTTTA GAAATTGTAA TTCGAGACTT
CCAAGCTATA GATTTGGAGA AGGGCATATT TTCAATAATT ATTACCAAGA TATTGCTGGT
TCAGCAATTA ACTCCAGAAT GGGTGCAAAA TTAAGAATTG AGCATAATTA TTTTGAGAAT
GTAAGAAATC CTATAGGTTC TTGGGATAGC TCTCAAATTG GATATTGGGA CCTTGCTGGG
AATGTTTTTG TTAATTGTTC TGGCAGTATT CCTGAAACTT CCACTTGTTA TTATAAGCCT
TCTTATGATT ATTCTCTTGA TTCTGTAGAG AGAGTAAAAG AAATAGTTAC CCAATATGCA
GGAGTTGGAA AGATAACCAA GTAA
 
Protein sequence
MLRSKVKWII LLMFLLQIVS GCSSKQTTDS TNIPPIAVPT NLKAEILSEK RVLLTWQDNS 
NNEDGFKVER KEEEKDWIQI AVVGFNTVNY IDSNLTPGKT YSYRVRAYNS SVNSDYSNEV
SITTPLIIAP ELSLSIDENN HVKLYWTTKS EVTQGYVIDK KEENGDWQEL LTLDVSSKSY
TDPDVISGKV YWYRIKAFSS NIESDYSEAY VYVPLINPSN SPDFSLVGFA TLNGGTTGGE
GGTVVYVSTG VELQNEINKG GPRIIYVNGT ITPQNNNNKY VIEVKNVSNI SIIGVGTYGE
LNGVGIKINN ANNIVVRNLI IHNVKDPAIA TQGPDCITIS GPARNIWIDH CELYNQFQGI
DKDYYDGLLD INGDVSYVTV SWCYFHDSWK TSLIGSSDTD NYNRTITYHH NWFRNCNSRL
PSYRFGEGHI FNNYYQDIAG SAINSRMGAK LRIEHNYFEN VRNPIGSWDS SQIGYWDLAG
NVFVNCSGSI PETSTCYYKP SYDYSLDSVE RVKEIVTQYA GVGKITK