Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_0404 |
Symbol | |
ID | 7081608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | + |
Start bp | 407477 |
End bp | 408370 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643457495 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_002352322 |
Protein GI | 217966816 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.11849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG CTAATCTGAA ATCAGGAGAG AGATTTTTTA TAGGTCTCCT TTTTGAGGAT AAGATTTTAA ATCTTACCAA GGCTATTTTA ATGTATTCTT CTATTTATGA AAAAAATTTA AGGTATGTGG AAAAAATTGA TGATATTCTT TATATGGATA ATCTTCAAGA GTATTTAAAT AAGGTTCAGG ATTTTATCTT TGAGCATAAT CTTATATATA GTTTAACCGA AGAAAAATAT AAATTTCTTC CCCCCATAAT AAAGCCTCAA AAGATTCTTG CTCTTGGAAG AAATTATGTA GAACATGCCA AAGAGTTAGG GCATAAAGTA CCTAGGGAGC CAGTGTTTTT CAGTAAGTCT CCTTCCTCCC TTATAGCCCA TGAAGAGGAA ATTGTTTATC CTAATTTTCT AACAAGAGTA GATCCTGAAG TTGAACTTGG AGTAATTATC AAAAAGAGAG GAAAATATAT TAAAGAAGAG AATGCAATGG ATTATGTTCT TGGCTATACT GTAGTGAACG ATGTAACGGC AAGAGATATG CAGGCTGAAG ATTTTTCCAA TACCAATCCA TGGTTTAGGT CAAAGAGTTT TGATACCTTC TGTCCTGTAG GTCCCTATTT AGTTTTGAAG GAAGGCATTA AGGATCCTCA TAATTTAAAT ATAGAGCTTA GGGTAAACGG AGAAATGAGA CAAAAGGATA ATACTAAAAA TATGATCTTC AAAATACCCC AAATAATTTC TTACATTTCT AAGCATTTAA CTCTTCAGGC GGGAGATATT ATTGCTACTG GCACTCCTTC TGGGATTTCT CCTATCTATC CGGGAGATAC TGTAGAATGT ATCGTAGAAA AAGTTGGTGT CTTGAGAAAT GAAGTAGTTA ATGAAGATCT ATGA
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Protein sequence | MKIANLKSGE RFFIGLLFED KILNLTKAIL MYSSIYEKNL RYVEKIDDIL YMDNLQEYLN KVQDFIFEHN LIYSLTEEKY KFLPPIIKPQ KILALGRNYV EHAKELGHKV PREPVFFSKS PSSLIAHEEE IVYPNFLTRV DPEVELGVII KKRGKYIKEE NAMDYVLGYT VVNDVTARDM QAEDFSNTNP WFRSKSFDTF CPVGPYLVLK EGIKDPHNLN IELRVNGEMR QKDNTKNMIF KIPQIISYIS KHLTLQAGDI IATGTPSGIS PIYPGDTVEC IVEKVGVLRN EVVNEDL
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