Gene Dtur_0390 details

Gene Information

• Locus tag: Dtur_0390
• ID: 7081594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dictyoglomus turgidum DSM 6724
• Kingdom: Bacteria
• Replicon accession: NC_011661
• Strand: +
• Start bp: 395188
• End bp: 395886
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643457481
• Product: ABC transporter related
• Protein accession: YP_002352308
• Protein GI: 217966802
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCATCG AAATCAAGGA TCTTTCAAAA AGTTATCAGG TTGGTTTAAC TAAGATTGAT 
GCCCTCAAAA AGTTATCCAT AGACTTTGAA AAGGGCAAGA TGTATGTAAT CCTTGGACCT 
TCTGGCTCTG GAAAAACCAC TCTTCTTAAC ATTCTTGGTG GAATTGATAA ACCCGACGAA 
GGAAAAGTTA TAGTTGATGG GGAGGATATA ACTAACTATA ACGATAGGGA GCTAACTAAT 
TATCGAAGGA GAAAACTTGG CTTCATTTTT CAGTTTTACA ATCTTGTGAA CTCTTTGACA 
GTCCTTGAAA ATGTACTTTC CACTAAATAC CTTTCAGAAA ATGGTTTAGA TCCTAAGGAA 
GTTCTTGAAG TTGTGGGAAT GTGGGAGCAT AGAGATAAAT TTCCTTTTGA ACTTTCGGGT 
GGTGAACAGC AAAGGGTAGC TATAGCAAGG GCAGTAGTGA AAAATCCATC TATAATACTT 
TGTGATGAGC CAACAGGTGC TCTTGATTTT GAAAATGCAA AGAGGGTACT AAAGCTTCTT 
GAGGATATTA ATAAAAGGTA TGGTACTACT ATTATAATTG CAACTCATAA TACTGCTATT 
GCAAAAATGT CCCATAAGAT TATAAGGCTA AGAAGTGGAG AATTGGTGGA GTACCAAGAC 
AATCCATCTC CAGCTCTTGC TGAGGAGGTG GTTTGGTAA 

 

Protein sequence

MFIEIKDLSK SYQVGLTKID ALKKLSIDFE KGKMYVILGP SGSGKTTLLN ILGGIDKPDE 
GKVIVDGEDI TNYNDRELTN YRRRKLGFIF QFYNLVNSLT VLENVLSTKY LSENGLDPKE 
VLEVVGMWEH RDKFPFELSG GEQQRVAIAR AVVKNPSIIL CDEPTGALDF ENAKRVLKLL 
EDINKRYGTT IIIATHNTAI AKMSHKIIRL RSGELVEYQD NPSPALAEEV VW