Gene Dtur_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0320 
Symbol 
ID7083143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp327878 
End bp330205 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content35% 
IMG OID643457427 
Productalpha-xylosidase YicI 
Protein accessionYP_002352254 
Protein GI217966748 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA CCGATGGACA TTGGAGAGTA AGAGAGGGAA TAAAAATTCA TTATCCATGC 
ATTCTTTGGG ATTATGAAAT TAAAGAAAAG GAAATAGTAG TTTATGCTCC TTCAAGTTTT
GTTAAAAACC GTGGTGAAAC TTTATATGGT CCTCTTTTTG AGATTCATTT CTCCTCACCT
TTCCCCAATA TCATAGAAGT TATCTCATAC CACTTTAAGG GAGTGATAGA AAAAGGACCA
GAATTTGAGA TAAATAGGGA TAAGAAATAT AAGCCTGAGA TATTAGATGA GGAGGATTTT
CTTATACTAA AGTCAGGAAA CCTAAAGGTA AAGATAAACA AAAAAGGCAC TTTTCAATAT
ACCTTTTACT GGAAAGACAA AAAACTTACT TCTTCGGGGC ACAAACATAT GGCATATGCT
ATAGATGAGA ACAAAAAAAC TTACACGATA GAAAGCTTAG ACCTTGGAGT AGGAGAATTA
GTATATGGAC TAGGAGAAAG ATTTGGTCCT TTTATAAAAA ATGGGCAAAC TGTAGAGATG
TGGAATGCAG ACGCAGGCAC AGTATCAGAT CAGACATATA AAAACATTCC TTTTTATGTA
ACTAATAGAG ATTATGGGGT TTTTGTAAAT CATCCTGAGA AGGTATCCTT TGAAATTGCT
ACAGAACATG TAGAAAGAGT ACAATTTAGT GTTCCTGGAG AAAGAATTAA TTATTTTTTA
ATTGGAGGAG AAAACTTAAA GGAGGTTCTT GAAAACTATA CCCTTCTTAC AGGAAGACCC
CATCTTCCTC CTTCTTGGTC CTTTGGTCTT TGGCTTACCA CCTCTTTTAT TACCAATTAT
GACGAAAAAA CAGTGACCAG CTTTATAGAA GGAATGAAAG AAAGAAATAT TCCTCTTCAT
GTATTCCACT TTGATTGCTT CTGGATGAGG GAATATCATT GGGTAAACTT TGAATGGGAT
GATAGGGTAT TTCCTAATCC TGAAGAAATG TTAAAAAGAT TAAAGGAAAA GGGGTTAAAA
ATCTGTGTAT GGATAAATCC ATATATTGCC CAAAGATCAA AACTTTTTGA AGAAGGAAAA
GAAAAGGGAT ATCTTTTGAA AAAGCCTGAT GGTAGTATAT GGCAAACCGA TGACTGGCAA
CCTGGTATGG GAATCGTAGA CTTTACAAAT CCCTCTGCAA GAGCCTGGTA CTCAAATTAC
CTAAAAAAGT TAATAAAAAT GGGAGTTGAC GTATTTAAAA CCGATTTTGG AGAGAGAATT
CCTACAGATG TGGTCTATTA TGATGGATCT GATCCAGAAA AGATGCATAA TTTTTATACC
TACCTCTACA ATAAGACCGT CTTTGAAACC CTTAAGGAAG AGCTTGGAGA GGAAAATGCC
ATGGTCTTTG CAAGATCTGC TACAGCAGGA AGTCAAAAAT TCCCAGTACA TTGGGGAGGA
GATTGTCTCT CTACTTATGA GTCCATGGCA GAAACCTTAA GAGGAGGATT GTCCTTAGGA
CTTTGTGGAT TTGGTTTTTG GAGTCATGAT ATAGCAGGAT TCGACAGCTC TGCAACCCCT
GATCTATATA AAAGGTGGGT TGCCTTTGGA CTTCTTTCTT CCCATTCCAG ACTCCATGGA
AATCATGATT ATAAAGTACC ATGGGTGTAT GATGAAGAAG CAGTAGATGT GTTGAGATTT
TTTGTAAACT TAAAATGTAA TCTTATGCCA TATCTATACG CAAAGGCAAT AGAAGCAGTT
GAAAAGGGAA TTCCAATGCT AAGAGCAATG GTACTTGAAT TTGAAGAAGA TCCTACATGC
CATTTTTTAG ACAGGGAGTA TATGTTAGGA GACTCCCTAT TAGTAGCACC TATATTCTCG
GAAACAGGAG AGGTAGAATA TTACCTTCCC AATGTAGGAG TTTGGACCAA TCTTTTGACA
GGCGAGAAAA AAGATGGAGG AAAATGGTAT AAAGAAAAGT TTGATTATTT CTCCTTACCC
CTTATGGCAA GACCGGGAAG TATTATCCCT ATGGGAGAAA ACAAAGAAAA ACCTGACTAT
GATTATGCTA ATAATGTAAT CTTATATGTA TTTGAGCCCC AAGAGGGAAA GAAAATATAT
TGCGAGGTTT ACAACCAAGA AAGAAAAGTA GATTTAAAAG TAAATCTTAT TAAAGAGAAA
AACATAATAA AGATAAACGT AGAAAAAGAT TCTGAAAAAC CCTATTCTAT ATTACTCTTC
AATATAAATG AGGCTAAAAA CATTACTGGT GGAAAAATAG AAAGAACCGA AAAAGGTATA
AAAATTGTAC CTGAAAAGAA AATTAAAGAG ATTACTATAG AGTTGTAA
 
Protein sequence
MKFTDGHWRV REGIKIHYPC ILWDYEIKEK EIVVYAPSSF VKNRGETLYG PLFEIHFSSP 
FPNIIEVISY HFKGVIEKGP EFEINRDKKY KPEILDEEDF LILKSGNLKV KINKKGTFQY
TFYWKDKKLT SSGHKHMAYA IDENKKTYTI ESLDLGVGEL VYGLGERFGP FIKNGQTVEM
WNADAGTVSD QTYKNIPFYV TNRDYGVFVN HPEKVSFEIA TEHVERVQFS VPGERINYFL
IGGENLKEVL ENYTLLTGRP HLPPSWSFGL WLTTSFITNY DEKTVTSFIE GMKERNIPLH
VFHFDCFWMR EYHWVNFEWD DRVFPNPEEM LKRLKEKGLK ICVWINPYIA QRSKLFEEGK
EKGYLLKKPD GSIWQTDDWQ PGMGIVDFTN PSARAWYSNY LKKLIKMGVD VFKTDFGERI
PTDVVYYDGS DPEKMHNFYT YLYNKTVFET LKEELGEENA MVFARSATAG SQKFPVHWGG
DCLSTYESMA ETLRGGLSLG LCGFGFWSHD IAGFDSSATP DLYKRWVAFG LLSSHSRLHG
NHDYKVPWVY DEEAVDVLRF FVNLKCNLMP YLYAKAIEAV EKGIPMLRAM VLEFEEDPTC
HFLDREYMLG DSLLVAPIFS ETGEVEYYLP NVGVWTNLLT GEKKDGGKWY KEKFDYFSLP
LMARPGSIIP MGENKEKPDY DYANNVILYV FEPQEGKKIY CEVYNQERKV DLKVNLIKEK
NIIKINVEKD SEKPYSILLF NINEAKNITG GKIERTEKGI KIVPEKKIKE ITIEL