| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0287 |
|---|
| Symbol | |
|---|
| ID | 7083110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 293533 |
|---|
| End bp | 294492 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643457397 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002352224 |
|---|
| Protein GI | 217966718 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.316315 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAGAG ATAAGAATGG GATAATAAAA AGTATTATAA AGTACATTTC AGAGGTTTTA
ATTTTAATTT TTGTAATATT TCATCTTTCT TATGCTTATG TAGAGCCGAG AGCAGACATC
AATTCAAAAA GCGAATTTAA TCCCCTTTTT AGAGTTTATT ATAGCAATGC GGTAATAGTT
TTGACCTATC ATGCAGTGGA TAGGAAGATT TTAGGACCTA TAAGCCTTTC TCCAGATCTT
TTTGAAAAGC ATATGGAATA TTTAAAGTAT ATGGGGTTTC ACTTTATTAC TCCTGACCTT
TTAAGAAGAT TTATGGAAGG AAGGGAAGAT GTACCTGATA ATGCAGTTCT TATAACCTTT
GATGATGGTT ACGAGAATTT TTACACGAAT GCTTACCCTA TATTAAAGAA ATTTCATATT
CCTGCTATTA ATTTTGTTAT TGTTTCAAAG ATTGGTAAGA ATGGAGCTTT TCCTCACTTG
AAATGGGATG AAATGAGGGA GATGTTAAAA AGCGGTTTGA TATATTTTGG ATCCCATTCT
TATGATTCTC ATTATTTAAT AAAGATCGGT ATATTTAAGA AGGCTCCTGC CCTTGTAGGT
AGAAAATTTG AGCTGTTTGG TTATAAAGAG AGCGAAGAGG AATATGAAAC AAGAATAGCT
TTTGATCTAT GGTATTCAAA GGTGCTTTTG GAAAATAATT TAGGTATTTC TGTTAAGGAT
TTTTGTTTTC CTTATGGGGC ATACAATGAG AAATTGTTAG AAATAGGTAA AAATTTAGGA
TATGAGGTTT TTTACACTAC CGAGAAAGGA ATAAATAAAA CAGCTAAATC AAAATATATC
TTAATAAAAA GATTAAATGC TGGTTCCTAT AATATGACTT TTTCGAGATT TCAAGCCCTT
CTATTTAAGT ATATTATACC TCACAAGGTT CAGTCTATTC CTCGTAAAGT TAGGAGTTAA
|
|---|
| Protein sequence | MGRDKNGIIK SIIKYISEVL ILIFVIFHLS YAYVEPRADI NSKSEFNPLF RVYYSNAVIV
LTYHAVDRKI LGPISLSPDL FEKHMEYLKY MGFHFITPDL LRRFMEGRED VPDNAVLITF
DDGYENFYTN AYPILKKFHI PAINFVIVSK IGKNGAFPHL KWDEMREMLK SGLIYFGSHS
YDSHYLIKIG IFKKAPALVG RKFELFGYKE SEEEYETRIA FDLWYSKVLL ENNLGISVKD
FCFPYGAYNE KLLEIGKNLG YEVFYTTEKG INKTAKSKYI LIKRLNAGSY NMTFSRFQAL
LFKYIIPHKV QSIPRKVRS
|
|---|
| |