Gene Dtur_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0141 
Symbol 
ID7082571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp129773 
End bp130720 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content37% 
IMG OID643457259 
Producthistone deacetylase superfamily 
Protein accessionYP_002352086 
Protein GI217966580 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.100578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACT CTGAAGGTAG CATAATTTGG GGAGAAGAAT CTTTTTTATA TTCTTTCCCT 
GAGCCCCATC CAATGAACCG AAGGAGACTT GAAAGCTTTG ACTCAGAATT TAAAAAGTTT
TCAAATTTGA GCAATGTGGA ATCTCCTGAG ATGGCTTCTT ATGATGAAAT TACTCTGTTT
CATACCAAAA GTTATACGGA TCTTGTTAAG GAGAAGTCAA AGACTGGAGA AGGGTATTTG
GATTATGGGG ATACGCCTGC TTTTTTGGGG TGTTATGAGG CTGCCTCTTA TGTGGTTGGC
TCTACCTTGA AAGGTATAAG GTTAATAGTG GAGGGAAAAT ATAAAAGGGT TTTTGTGCCT
ATGGCAGGCC TTCATCATGC AAGAAGAAAT TCTGCTTCTG GATTCTGCAT ATTTAATGAT
ATTGGGGTTG CCATTGAATA TTTAAGGAAA AATTATGGAA TAAAAAATAT TCTCTATGTG
GATATAGACG CTCATCATGG TGATGGAGTT TTTTACGAAT ATGTAGATGA TCCCCACTTA
TTCATAGCTG ATGTGCATGA GGATGGAAGA TTTCTTTATC CTGGAACAGG AAGAAGGGAC
GAAAGGGGAG AAAAACAAGC TTATGGGACA AAGCTTAATA TTCCTCTTCT TCCAGGTTCA
GGTGATGATG AACTTTTACT TGCTTTTGAG GAAGTAAAGA ATTTTGCGTG GGAGGTAAAG
ATTGAATTTA TCATACTTCA GGCAGGAGTA GATGGTATTT CTGGAGATCC TATAACTCAT
TTGAATTATA GCATAGAGGG TTATGGTAAA TTTGTAGAGG GAATGGTTGA TGTGGCAAAT
CAAACATGTG GTGGTAAGAT TCTTATTCTT GGGGGTGGTG GATATAATCC TGAAAATACT
AAAAATGGCT GGATGAGGGT TTTGAGGGTT ATTTATGGAG AGTTTTAA
 
Protein sequence
MKNSEGSIIW GEESFLYSFP EPHPMNRRRL ESFDSEFKKF SNLSNVESPE MASYDEITLF 
HTKSYTDLVK EKSKTGEGYL DYGDTPAFLG CYEAASYVVG STLKGIRLIV EGKYKRVFVP
MAGLHHARRN SASGFCIFND IGVAIEYLRK NYGIKNILYV DIDAHHGDGV FYEYVDDPHL
FIADVHEDGR FLYPGTGRRD ERGEKQAYGT KLNIPLLPGS GDDELLLAFE EVKNFAWEVK
IEFIILQAGV DGISGDPITH LNYSIEGYGK FVEGMVDVAN QTCGGKILIL GGGGYNPENT
KNGWMRVLRV IYGEF