| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0111 |
|---|
| Symbol | |
|---|
| ID | 7082541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 107289 |
|---|
| End bp | 110555 |
|---|
| Gene Length | 3267 bp |
|---|
| Protein Length | 1088 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 643457232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002352059 |
|---|
| Protein GI | 217966553 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3459] Cellobiose phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCA AAATTAAATA TGAGGTGGAT AAAAAGAAAG ATTTGACTTT TAATATTTAC
AATTACAACT ATGCCTTCCC CTTTTCCAGC TTCCTTCCCG GAATATCTGG AATTTTAGGA
ATCCCTATGT GGTGTTTTTA TGTAAATAGG GGACAATGTA TTACAAGTTT TGGATTCGAG
AGTAAAGATG GTGCTATACT TGAGTTTCAT CCTGCTAACA AAGCCTATAG GCTTACTCCT
ATATATGGTT TTAGAACCTT TATAAAAATT GACAATGTTT TTTATGAGCC TTTTAGAGAG
TCCCCTGAAA ATGAAACTTT TGAGAGAGAA AATTATATGA GTATAACTCC CTATGATCTT
ACCATATATG AGATAAACAA AACCCTAAAT ATCTCTTGCA AAGTGAACTA CTTTACTCTC
CCTAATGAGC CTGTAGGAGC CTTAATAAGA ATTTTTACTA TAAAGAATCA TGGAGAAAAC
GAATTGAACC TTGAAATTAT TGATGGTATA CCTCAATTTC TACCCTATGG ACTTACCAAT
GAAGTTATGA AGAATATGTC AAGAACCATT GAAGCCTGGT ATAGGGTAGA CAATTTAGAG
AATAATGCAC CCTTTTATAG GCTTTATACA ACCTTTCAGG ATATAACCGA AGTAAAGGTA
ATAAAAGAAG GACATTTTTA TTTTGCTCTC TCAGAAGACG AAAAACTTCT TCCTGTAATA
ATAGATCCTG ATCTCATCTT TTATCCTTCT AATGATTTCT CCTATCCTTA TAAATTTGCA
AAGGGAAAAT TTACCCTTCC TAAGGCAGTA TTTTATGGGA ATAGAACTCC CTCTGCTTTC
TCCTACACTA TAATTACTCT TTCTCCAGAT GAGGAAAGAT CCATAATATC TTTTGCAGGA
AAGGCAGATT CCTTGGAGAG ATTAAATAAA ATAGTAAAAG ATTATGCTCA TAAAGAATTT
GTCGAGAAAA AAGCTAAAGA GAATGAGATA CTCATAAAGA GCATTATGGA TAATGCCTTT
GTACATAGTG CTTCAAAAGA ATTTAATTCT TACGTGAGAC AAAGCTTTCT TGATAACCTT
TTAAGGGGAG GCCTCCCTAT TACTTTAAAC TATAATTCTA AAAAAGATGT AATTTATCTC
TTTGGAAGAA AACATGGAGA TTTAGAAAGA GATTATAACT TCTTTACCCT CGAAGCTAAT
TATTTCTCTC AAGGAAATGC CAACTACAGA GATATAAATC AAAATAGAAG AAATGATATC
TATTTTAATC CTGATGTAGA ACACTTCAAT ATATGGTATT TCATAAACCT TATTCAGCTT
GATGGATATA ATCCATTAGT AATAAAGGGA GTTAAATACC TTATAAAAGA AGATGTTTTA
GGAGAATTAA AAAATTGGGT TTCCGAATAT ATAGAAAAGG AGTTAAAAGA AATACTTCAA
AAACCTTTTA TTCCTTTTGA CGTAATAAAG GTTCTTGAAA AGTACAACTA TGAGCTGAAA
AAGGGAAATC TTATTGACTT TATCTCATTC CTACTTACAG GTAGTAGAAA AATAGAGTTT
GCAGAACATG GAGAAGGATA TTGGATAGAT CATTGGTTTT ACAACTTAGA TCTCATAGAG
AGCTATGAGT CTATATTTCC AGATAAAATG GAAGATCTCC TTTTAAATCA AGAGATTTTC
ACCTATTATG ATAACTCTGA AATTGTGCTT CCAAGAGAAG AAAGGTATGT TCTTACAGAA
AATGGAGTAC GCCAATATAG ATCTTTAAGA AATGATGAAG AAAAAGTAAC TCTTATAAGA
TCAAGGAAGA TAGAGCCTAA TAAAGTAAGA ACCAAATATG GAAAAGGAGA TATTTATTAT
ACCTCTTTAC TTTCCAAACT TATTGCCCTT GCTACTGTTA AATATTCAAC TCTTGATCCA
GAAAATATAG GAATAGAGAT GGAGGCAGGA AGACCTGGCT GGAATGATGC ATTAAACGGT
CTTCCTGGAC TTTTTGGATC ATCAGTAAAT GAAACTTTTG AACTCAAAAG ACTTCTCTTG
CTTATAAAAT CATGGATTGA AAAATACAAA CTTTATGAAA GAGAAGTGAG AATTCCAAAA
GAATTATCAG AACTTTTAAA TTCCCTTGTG GAAATAACAA AAGAAAATCT TAAAGGTAAG
ATATCAAACT TTGAGTTTTG GGATAAAAGT TCAAATCTAA GAGAAGAATA TAGAGAAAAA
ACTAAATTGG GTATATCAGG GGAAGAAATA TCCATAAGAC TTTCTGAAAT TTTAAACATC
TTGGATCTAT TTTTAGAAAA ATTAAATAAA GAGCTTGAAA GAGCCTTTGA TAAAGAAAAG
GGACTTTATC ATACATATTT TTATTATGAT CTTGTGGATT ATGACATTAT AGAAAAAAAT
GGAAAAAAGG TAATAAAACC AAAGAAATTT GTAAGAAAAG ATATGCCCCT TTTCCTTGAA
GGACAAGTCC ACTATCTCAA AACTGAAAGG GACAAAAATA AAAAGAGAGA GATCATGGAG
AGAATAAAAC AAAGCGATTT ATATGACAAA AAATTGAAAA TGTATAAAGT TAATGCTCCT
TTGGACTCTG CCCCCCTTGA AATTGGGAGA ATCAAAGCTT TTCTTCCTGG ATGGCTTGAA
AATGAAAGCA TATTCTTACA TCTTGAATAC AAATATCTCC TTGAAATATT AAAAGCAGAA
GAATTTGAAA AATTCTATGA AGAAATGAAA AATTGTCTTA TACCCTTTAT GAATCCAGAA
ACATATAGAA GAAGCATATT TGAAAATGTA TCCTTTATTG TGAGTAGTAG AAACCCTGAT
CCAAATCTTC ATGGAGCAGG ATTCTCTGCA AGACTTTCTG GAAGTACTGC AGAATTTTAC
CATATGCTCC TTGTTATGGC TTTTGGTAAA AATCCATTTT ACCTTGATGA AAACAATAAT
CTTTGCTTTA AACCAACTCC ATCAATACCG GATTTCCTTT TCACCATAAA AGACGAATTT
GTAAATTATT ACGGCTGTGG TAAAGAAGAA AAAATATTCA TACCTAAAAA TTCTTTTGTT
ATAAACTTCC TTAAAAATAC CCTTATCTAC TTTATAAATC CTAAAAGGAA AAATACTTTC
GGAGAAAATG GAGCTAAGAT AAAAAAATAC ATATTATACA GCAGTAATGA AGAAAAGGAG
GAAATAAATA GAGAAATACT AACATCTCCA TACTCTTATA ATTTGAGAAG TGGAGTTTAT
GAAAAATTAG AAATCGTCTT AGAATAA
|
|---|
| Protein sequence | MNPKIKYEVD KKKDLTFNIY NYNYAFPFSS FLPGISGILG IPMWCFYVNR GQCITSFGFE
SKDGAILEFH PANKAYRLTP IYGFRTFIKI DNVFYEPFRE SPENETFERE NYMSITPYDL
TIYEINKTLN ISCKVNYFTL PNEPVGALIR IFTIKNHGEN ELNLEIIDGI PQFLPYGLTN
EVMKNMSRTI EAWYRVDNLE NNAPFYRLYT TFQDITEVKV IKEGHFYFAL SEDEKLLPVI
IDPDLIFYPS NDFSYPYKFA KGKFTLPKAV FYGNRTPSAF SYTIITLSPD EERSIISFAG
KADSLERLNK IVKDYAHKEF VEKKAKENEI LIKSIMDNAF VHSASKEFNS YVRQSFLDNL
LRGGLPITLN YNSKKDVIYL FGRKHGDLER DYNFFTLEAN YFSQGNANYR DINQNRRNDI
YFNPDVEHFN IWYFINLIQL DGYNPLVIKG VKYLIKEDVL GELKNWVSEY IEKELKEILQ
KPFIPFDVIK VLEKYNYELK KGNLIDFISF LLTGSRKIEF AEHGEGYWID HWFYNLDLIE
SYESIFPDKM EDLLLNQEIF TYYDNSEIVL PREERYVLTE NGVRQYRSLR NDEEKVTLIR
SRKIEPNKVR TKYGKGDIYY TSLLSKLIAL ATVKYSTLDP ENIGIEMEAG RPGWNDALNG
LPGLFGSSVN ETFELKRLLL LIKSWIEKYK LYEREVRIPK ELSELLNSLV EITKENLKGK
ISNFEFWDKS SNLREEYREK TKLGISGEEI SIRLSEILNI LDLFLEKLNK ELERAFDKEK
GLYHTYFYYD LVDYDIIEKN GKKVIKPKKF VRKDMPLFLE GQVHYLKTER DKNKKREIME
RIKQSDLYDK KLKMYKVNAP LDSAPLEIGR IKAFLPGWLE NESIFLHLEY KYLLEILKAE
EFEKFYEEMK NCLIPFMNPE TYRRSIFENV SFIVSSRNPD PNLHGAGFSA RLSGSTAEFY
HMLLVMAFGK NPFYLDENNN LCFKPTPSIP DFLFTIKDEF VNYYGCGKEE KIFIPKNSFV
INFLKNTLIY FINPKRKNTF GENGAKIKKY ILYSSNEEKE EINREILTSP YSYNLRSGVY
EKLEIVLE
|
|---|
| |