| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0082 |
|---|
| Symbol | |
|---|
| ID | 7082349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 83294 |
|---|
| End bp | 85204 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643457207 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002352034 |
|---|
| Protein GI | 217966528 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.5866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TCCTTTTTAT TTTCCTTCTT CTCTTTCTCT TAATTGTTTC CTCTGGAAGC
TTTGCCCAAG GTCTTCCTGC TGGTATTCCT AGAGATAAAA CCTTAATTCT ACCATTCTTA
TTTGCCCCCC TTCCTGTTCC TGGAAACTGG AACTTATGGG CTGGCTGGAG GGCACAAAAC
TGTGGATTAC ATCAATTTGT TACAGAACCT CTTTGGACAA TAAACCCCGA CGTTGTTAAA
GGGGGAATAA TCAACGCATT AGCAGCGGCG GACCCTATTT ATAACAGTGA TTTTACAAAA
TTAGTAATAA AGCTTAGAAA AGGAATATAT TGGAGTGATG GTGTTGAATT TACTGCCGAT
GATTTAGTCT ATACTATTCA AACAGTAAAA GATACTGAGG GGCTTGACTA TCATGGAGCA
ATGCAAGATG TAAAAAGGGT TTATGCTCCA GACAAATATA CAGTGGTAGT AGAACTTAAC
AGACCCAACA GTAGATTCCA TACTTTCTTC CTTGAAAGAT GGGGCGCCCT AAGACCTATG
CCAAAACATA TTTTTAGCAA AGTCAAAGAT GTACTTACTT ACGATTTTAA CCCTCCAGTA
AGTTTAGGAC CCTATGTGTA TGTAGCCCAT GACCCAGCAG GATATTGGGT GCTTTGGAAA
AAGAGAGAGG ATTGGAAGAG AACAGTTACT GGACAACTGT TTGGTGAACC AAAACCTGAG
TATGTATTAT TTATAAACCA TGGTACACCA GAGAAACAAA ACATGGCTAT GCTGAGACAC
GAACTTGACG CAATACAAGG TACAGCAGAA CAAATGCTAA CAATGTTAAA AATGAGTAAT
ACCACAAGAA GCTACCGTGA TACATGGCCC TATATTGATC CAAGAGACAT ATCTACCAGA
GGGCCAGCCT TTAACCATTT AGTACCCCCA TACAATAATA AAGACGTAAG ATGGGCACTT
GCATTATCCA TAGATGTGGT TGAAACAATT ATATCTACAT ATAATGGAAT GGCTGCAATG
ACACCAGGAC TTCCTCTCGT AGTTGGTAAA AACTTCTATG ATTGGTATTT CAAACCCTTA
AAACCATGGC TTGAAAACCT AACATTAGAT ATTGGCGGTG GACAAAAATT TAAACCTTGG
GATTCAAAGG CACCTTGGAG ACTATTAGAA TGGGCAAAGA AAAACTACAA AGTAGATATT
GATCCTAATA ATGAAGAAGA GGTAAGGCTC ACATTAGGTT ATGGATGGTG GAAATATGCA
CCTGATGTGG CAGAGAAATT ACTAATAAAG AATGGATTTA AGAAGATAGG AGGAAAATGG
TATTTGCCCG ACGGCAAACC TTGGAAAATT ACTATATTAA GAGGTCCAGA TCCAACAGAC
ATGGCAAATA TCTTCATTCT TGGTGTAGCT GAGCAGTGGA AAAAGTTTGG TATAGATGTG
GTCTTCAATG TGACAACTGC AGCAGCTACA TTGGCCTTAA ATGGACAATT TGAAGTACTC
AATACAGGGC ATGGCGGATT TGCAGGAGAG CCTTGGGGAT TGCATCCTGA TTTATACTTG
TGCTTTAATG CTATGAATAG TAAATATGTC AGACCTGTAG GAGAACCAAC CCTCGGTTGG
GCTGGAAGAT GGAGTGATCC TCGCATGGAT AAAATAATTG CTGAATTAGA AAGAACTCGT
TGGACTGACT TTCCAAAAAT CAAAAAACTT GGCTTAGAAG GTTTGAAAGT AGAAATTGAA
GAAATGATAT CAATTCCAAT AATTAACTGT CCAATAGCTA TAGTGTTTGA TGAATATTAT
TGGACCAACT GGCCAAGCCC TAAGAATGAT TATGCACGTT GCGACAATTT CACCACATGG
CCACAGTTAA AATATATCTT GCATCAAATA AAACCCACTG GTAAAAAGTA A
|
|---|
| Protein sequence | MKKLLFIFLL LFLLIVSSGS FAQGLPAGIP RDKTLILPFL FAPLPVPGNW NLWAGWRAQN
CGLHQFVTEP LWTINPDVVK GGIINALAAA DPIYNSDFTK LVIKLRKGIY WSDGVEFTAD
DLVYTIQTVK DTEGLDYHGA MQDVKRVYAP DKYTVVVELN RPNSRFHTFF LERWGALRPM
PKHIFSKVKD VLTYDFNPPV SLGPYVYVAH DPAGYWVLWK KREDWKRTVT GQLFGEPKPE
YVLFINHGTP EKQNMAMLRH ELDAIQGTAE QMLTMLKMSN TTRSYRDTWP YIDPRDISTR
GPAFNHLVPP YNNKDVRWAL ALSIDVVETI ISTYNGMAAM TPGLPLVVGK NFYDWYFKPL
KPWLENLTLD IGGGQKFKPW DSKAPWRLLE WAKKNYKVDI DPNNEEEVRL TLGYGWWKYA
PDVAEKLLIK NGFKKIGGKW YLPDGKPWKI TILRGPDPTD MANIFILGVA EQWKKFGIDV
VFNVTTAAAT LALNGQFEVL NTGHGGFAGE PWGLHPDLYL CFNAMNSKYV RPVGEPTLGW
AGRWSDPRMD KIIAELERTR WTDFPKIKKL GLEGLKVEIE EMISIPIINC PIAIVFDEYY
WTNWPSPKND YARCDNFTTW PQLKYILHQI KPTGKK
|
|---|
| |