| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0047 |
|---|
| Symbol | |
|---|
| ID | 7082314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 46485 |
|---|
| End bp | 48530 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643457172 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002351999 |
|---|
| Protein GI | 217966493 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.10552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGGA AAAGAATCAG ACTTATAAAA AATGTAGTTG AAGATTCCAT ACTTTTGAGA
GGGATAACCC TTTATCTTAT TGTGGTTTCT CTTTTTTCAG TATGGTATTT TTTGAATCTT
TCTTCTATCT ATATCTCTAG TATAATTCTT TTAACTTTGA TTGGTTTTGT ATTTAGTTAC
TATAGAAGAA AAGAAAGAAA TATCCTCTTA AAGATCTTAA TGACCATAGG TATGATGTAC
TTTTTGAGGC AATTTTTTGT GGAATTAATT AAAAATCCTT TTGATCCTCG TATTCCCCTT
GCTACTTTCT TGATTAATCT TAATACTATT CATAGTTTTG ATCTTCCTAC AAGACTTGAT
CTTGGCTTTT CCTTCTTTAT AAGTATTATT CTTATGATTA TTGCTGGAAT ATTTGCAAGG
GAAGCAATTT TTATTGTGTT CTTTCTTTTC TTCCTTTTGG GGATGATTAT ATTCCTTATG
TTAGTTAATG ATTATAGAAT TGTTCCAGGA TATATTTTTT CCATTACTCT TTTCGTACTT
TTCGTAGGCT TTTTAATTTT CCCTCTTCTT CCTAAGGATA TAAGAATAGG CTTTAGGCAA
GACATAATGT CTCAGCTAAT AACGAGGCTT ACTAATTTTC AGGGAGAGTT AAAATCTCCC
TATGCCGAAG CCAGCAACCT CTATAAACTT CCTGAAGGAA GGAAAATTCC ACCCTTAAAA
TTTAATCCTG AAGAATACTA TGGTTTTGCA CCATTTCTTG ATTTAAGGCA GAGGGGAGAA
CTTTCTTCCT CTATTATATT TAGAGTTTTA ACACCTTGGG GTATTTATCA CAGGGGAATT
GCCTTTGATA CCTATAATGG TTTTGGATGG TATCAAAGTA AAGAAGAAGT AAAAACCATA
GATACCATAA GTCAACCCTT TCTTCTAAAA GAAAATACAA GGCAAGAAGA ATACCTTCAA
AGAGCCACTT ATTTTATTGA AAGAGATTTT CAAAATAACA TAATCTTCCT TCCTAAGGGT
ACAGAAAGGC TTTATTATCC CTCTCCAATT ATCTTTAAGG ATAGTGAGGA CGGATATAGG
TCTCCCTTCG AACTTCCTAA GGGACTTATA TATACTGGTT TTTATCAAGA GCAATATTAT
TCTACTAAGG AATTATTGGA GACTAAAATT CCTCCTCAAA ATCAGTTTTT AAATTATTTG
CAATTACCTA ATATTCCTAA AAGGGTAAAA GATCTTACCT TTGAAATAAC AAAAGGATAC
CAAACTCCAT GGGAAAAATT GATGGCAATT AAAAATTATC TTGAAGACAA TTATGAATAC
TCCCTCGATA TACCACCTCT CCCTGATAAT GAGGATGCAG TGGACAATTT TCTTTTTGAA
GTTAAAAAGG GATATTGTGA ACAGTTTGCA ACAGCCTTTG CGGTTATGGC AAGAATTATT
GGAGTTCCCA GTAGACTTGT TACAGGATAC GGTCCTGGAG ATCTTAATCC TTGGACTGGA
ATGTATGAGG TAAAAGTGAA GAATGCCCAT GCCTGGGTTG AAATATATCT TGAGCCTTTA
GGCTGGATTA CAATAGATCC TACTCCTTTT GCTTTGGGCT CAGAAGAAAG AGAAAGGAAA
GAGTCGGCAA ACTTTTTAGG GATAATCTTT AACTCCATTG GGATAATTGT ACAAAATGTA
TTTGTTGGAG CTTATAAAGT TTTAAATAAG TATCAGTATA TAGTTATTCC TGTTTTTGTT
TTATTCTCCT TTTTACTGAT GAGAAATTTT GTGAATTTTC TTAGACTTAC AGAGGAGGAT
AGAATCTTTA GGAGGGTAAT TAAAAGATTG AAAAGAAAAG GATTTATTAA AGAGGATGTT
AGTCTATACA ATATGCTGGA GCCTTTGGGG GATTTAGGAA GAAATTTTGC AGGCTTATAT
TATGCCTTGA AATTTGCGCC TTTAAATGAG GAAGAAAAAA GAAAATATAA AGAGAATTTC
AAAGAGCAAG CTAAGAAATT ACTTTCTTAT AATCCTTCCA CATCCCGTGA GAAGGTCAAG
GATTAA
|
|---|
| Protein sequence | MERKRIRLIK NVVEDSILLR GITLYLIVVS LFSVWYFLNL SSIYISSIIL LTLIGFVFSY
YRRKERNILL KILMTIGMMY FLRQFFVELI KNPFDPRIPL ATFLINLNTI HSFDLPTRLD
LGFSFFISII LMIIAGIFAR EAIFIVFFLF FLLGMIIFLM LVNDYRIVPG YIFSITLFVL
FVGFLIFPLL PKDIRIGFRQ DIMSQLITRL TNFQGELKSP YAEASNLYKL PEGRKIPPLK
FNPEEYYGFA PFLDLRQRGE LSSSIIFRVL TPWGIYHRGI AFDTYNGFGW YQSKEEVKTI
DTISQPFLLK ENTRQEEYLQ RATYFIERDF QNNIIFLPKG TERLYYPSPI IFKDSEDGYR
SPFELPKGLI YTGFYQEQYY STKELLETKI PPQNQFLNYL QLPNIPKRVK DLTFEITKGY
QTPWEKLMAI KNYLEDNYEY SLDIPPLPDN EDAVDNFLFE VKKGYCEQFA TAFAVMARII
GVPSRLVTGY GPGDLNPWTG MYEVKVKNAH AWVEIYLEPL GWITIDPTPF ALGSEERERK
ESANFLGIIF NSIGIIVQNV FVGAYKVLNK YQYIVIPVFV LFSFLLMRNF VNFLRLTEED
RIFRRVIKRL KRKGFIKEDV SLYNMLEPLG DLGRNFAGLY YALKFAPLNE EEKRKYKENF
KEQAKKLLSY NPSTSREKVK D
|
|---|
| |