| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0003 |
|---|
| Symbol | |
|---|
| ID | 7082768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 2251 |
|---|
| End bp | 3240 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643457131 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_002351958 |
|---|
| Protein GI | 217966452 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TTCCTGATTT CCAATTTCCC AAAAATAATT TATCCATAAA AACAATTTTT
ACTATCATTA TTGTAGTTAT CTTATTGGTT TTGGTTTTTT CAAGCTTTTA TTTTGTGGGA
CCTGCGGAGG TAGGAATAGT AAAGAGATTT GGGAAGATTA TTGGTATGTA TGATCCCGGT
ATTCATTGGA AGATTCCCTT GATAGATCAG GTTATTAAAA TAGATGTTTC AGCAATAAGG
AGACTTGAAA TTGGTTTTCG CACTATAACC TTGGGACCTC CTCCTCAATA TAGAGATGTG
AAAGAGGAAT CTCTTCTTTT GACCAAGGAT GGTAAAATTG TGGATTTAGA TTTTGTGGTT
CAATACCAGA TAACTGATGC TGTATCTTAT CTTAGTAATG TGAAGGGAGA AGAGAAACTT
CTTCGTGACC TTGCTCAGGC TTCTATGAGG CAAATCGTTG GAGGGTATGA ATTTGACGAG
ATTTTAACAG TTTCTAAGGA AGAAATTCAG AATAATGTAA AAACTCTTTT GCAAAATTTA
TTGAATAATA ACAATTTTGG TGTTAAGATT GTGAATGTTC AACTTCAAGA CGTAGTTCCC
CCAGAGCCTG TCCAACCAGC ATTTCAAGAT GTAATAAATG CAAAATCAGA AAAGGATAAA
CTTATTCTTG AAGCTCAGGC ATATTACAAC CAGATTGTTC CCGAAGCAGA AGGTCAAGCG
GCAAAAATTA TTGCCGAAGC AGAGGCTTAT ATGGACCAAC AAATAGAGAG AGCAAAAGGC
GATGCTCAAA GATTTAAAGC ACTACTTGAA AGATATAAAA ACTCTCCATC TCTTATAAGG
ACAAAGCTTT ATTTAGAGGC TATGGAGATG GTGCTTCCAA AAACTAAGAT TATTATAATT
GATGATCCCA AGGGATCTAT GAAAATATAT AGTTTTCCAT CAGAGCTTTT CACAAGTACC
ATAACTCTTC AAGAGGGGGA TAAAAAATGA
|
|---|
| Protein sequence | MQNFPDFQFP KNNLSIKTIF TIIIVVILLV LVFSSFYFVG PAEVGIVKRF GKIIGMYDPG
IHWKIPLIDQ VIKIDVSAIR RLEIGFRTIT LGPPPQYRDV KEESLLLTKD GKIVDLDFVV
QYQITDAVSY LSNVKGEEKL LRDLAQASMR QIVGGYEFDE ILTVSKEEIQ NNVKTLLQNL
LNNNNFGVKI VNVQLQDVVP PEPVQPAFQD VINAKSEKDK LILEAQAYYN QIVPEAEGQA
AKIIAEAEAY MDQQIERAKG DAQRFKALLE RYKNSPSLIR TKLYLEAMEM VLPKTKIIII
DDPKGSMKIY SFPSELFTST ITLQEGDKK
|
|---|
| |