Gene BCAH187_A5541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH187_A5541 
Symbol 
ID7076637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH187 
KingdomBacteria 
Replicon accessionNC_011658 
Strand
Start bp5135286 
End bp5135819 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content32% 
IMG OID643453937 
ProductRNA polymerase sigma factor 
Protein accessionYP_002341430 
Protein GI217962852 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AGGTAGAAGA ATTGATTGAC ATATATAAGC AGCAAATATA TTCCTTATGC 
TATAAGTTAG CGAAAACGAA AGAAGATGCG GAAGATATTT TTCAAGAGAC ATGGATAAAA
GTTTTTTCAT CGCGGCACCA ACTTTCTTAC GTGGAAAATT ATAAAAAGTG GATTACTACG
ATTTGTATTC GTACGTTTTA TGATTTTTAT CGTAAAAAGA AAAGATGGAA AGATCGTGTA
TTGGATTTAT TTCATAAAGA AGATGGCGGA GAAATTGAGC ATGCAGATGA TGTGAATATA
TCAGAAGAAT TTATTCAAAA AGTCGAAGCA GAAATGATAC GAGAAGTTAT ACAGTTATTA
AACGGAAAAT ATAAAACAGT GCTCGTACTC TACTACTATG AACAATATTC TTACAAAGAA
ATGAGTGAAA TATTAAATAT ACCAATTGGT ACGGTGAAAT ACCGCCTTAA TTATGCGAAG
AAGCAAATGC GAGAACATTT GGAGGGGTTC GTTTATGAAG GAAGACAAAT TTGA
 
Protein sequence
MEEKVEELID IYKQQIYSLC YKLAKTKEDA EDIFQETWIK VFSSRHQLSY VENYKKWITT 
ICIRTFYDFY RKKKRWKDRV LDLFHKEDGG EIEHADDVNI SEEFIQKVEA EMIREVIQLL
NGKYKTVLVL YYYEQYSYKE MSEILNIPIG TVKYRLNYAK KQMREHLEGF VYEGRQI