| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5012 |
|---|
| Symbol | ldh |
|---|
| ID | 7074827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 4649190 |
|---|
| End bp | 4650134 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643453420 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_002340933 |
|---|
| Protein GI | 217962361 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01771] L-lactate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0813817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GTATCAATCG TGTAGTATTA GTAGGAACAG GAGCTGTAGG TTGTAGTTAC
GCTTACTCAA TGATCAACCA AGGTGTAGCT GAAGAATTCG TATTAGTAGA TGTTAATGAA
GCAAAAGCAG AAGGGGAAGC AATGGACTTA AGCCATGCGG TACCATTCTC TCCATCACCA
ACAAAAGTTT GGAGCGGTAG CTATGCAGAT TGTAAAGATG CAGATTTAGT AGTTATCACT
GCTGGATTAC CACAAAAGCC AGGTGAAACT CGTTTAGACT TAGTTGAGAA AAATACAAAG
ATCTTTAAAC AAATCGTTCG CGGTATTATG GATAGCGGAT TCGATGGAAT CTTCTTAATC
GCAACTAACC CAGTTGATAT TTTAACTTAC GTAACTTGGA AAGAATCTGG TCTACCAAAA
GAGCGCGTAA TTGGTTCTGG TACTACTTTA GACTCTGCTC GTTTCCGTTA CATGTTAGGT
GACTACTTAG ATGTAGATCC ACGTAACGTT CATGCTTACA TCGTTGGTGA ACACGGTGAC
ACTGAACTTC CAGTATGGAG TCACGCTACT ATCGGTGTAC AAAAACTAGA AACAATTTTA
GCTAACAACG CACAGTACAA ACAAGAAGAC TTAGATAAAA TCTTCGAAAA CGTACGTGAT
GCGGCTTACC ATATTATCGA GCGTAAAGGT GCAACTTACT ACGGAATCGG TATGTCACTA
CTTCGTGTAA CTAAAGCAAT CTTAAACAAC GAGAACAGCG TATTAACTGT ATCTGCATAC
CTTGAAGGTC AATACGGTGA GAAAGATGCT TACGTAGGTG TTCCAGCTGT AATTAACCGT
GAAGGTGTAC GTGAAATTGT AGAGCTTGAG TTAAATGAGG ATGAAAAAGC GAAATTTGCT
CATTCTGTAA AAGTATTAAA AGAAACAATG GCACCAGTAC TATAA
|
|---|
| Protein sequence | MKKGINRVVL VGTGAVGCSY AYSMINQGVA EEFVLVDVNE AKAEGEAMDL SHAVPFSPSP
TKVWSGSYAD CKDADLVVIT AGLPQKPGET RLDLVEKNTK IFKQIVRGIM DSGFDGIFLI
ATNPVDILTY VTWKESGLPK ERVIGSGTTL DSARFRYMLG DYLDVDPRNV HAYIVGEHGD
TELPVWSHAT IGVQKLETIL ANNAQYKQED LDKIFENVRD AAYHIIERKG ATYYGIGMSL
LRVTKAILNN ENSVLTVSAY LEGQYGEKDA YVGVPAVINR EGVREIVELE LNEDEKAKFA
HSVKVLKETM APVL
|
|---|
| |