Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A4220 |
Symbol | deoB |
ID | 7077614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | - |
Start bp | 3929887 |
End bp | 3931071 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643452638 |
Product | phosphopentomutase |
Protein accession | YP_002340151 |
Protein GI | 217961581 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000013434 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT ATAAACGTAT ATTCCTAGTC GTAATGGACT CTGTTGGAAT CGGTGAAGCA CCAGATGCTG AACAATTTGG TGATTTAGGA TCTGACACAA TTGGTCACAT TGCTGAGCAT ATGAATGGGT TACAAATGCC TAACATGGTG AAATTAGGTC TTGGTAACAT TCGTGAAATG AAAGGCATCT CTAAAGTAGA AAAACCACTT GGATATTATA CAAAAATGCA AGAGAAATCT ACTGGTAAAG ATACAATGAC AGGTCATTGG GAGATCATGG GTCTTTACAT TGATACACCA TTCCAAGTGT TCCCAGAAGG TTTCCCAAAA GAATTACTTG ATGAATTAGA AGAAAAAACA GGCCGTAAAA TCATCGGTAA TAAACCAGCT TCTGGAACTG AAATTCTTGA TGAACTTGGT CAAGAACAAA TGGAAACAGG CTCTTTAATT GTTTACACTT CTGCCGATAG CGTTCTGCAA ATCGCAGCAC ACGAAGAAGT AGTGCCGCTT GATGAGTTAT ATAAAATTTG TAAAATTGCA CGTGAATTAA CGTTAGATGA GAAGTACATG GTAGGCCGCG TTATCGCTCG TCCATTCGTT GGTGAGCCTG GAAACTTTAC ACGTACACCT AACCGTCATG ACTATGCATT AAAACCATTC GGCCGTACAG TAATGAATGA ATTAAAAGAT AGTGATTATG ATGTGATTGC TATCGGTAAA ATCTCTGATA TCTATGATGG TGAAGGGGTA ACTGAATCAC TTCGTACGAA GTCTAACATG GATGGAATGG ATAAGCTTGT AGATACATTA AATATGGACT TTACAGGTCT TAGCTTCTTA AACTTAGTTG ACTTTGATGC GCTATTCGGT CACCGTCGTG ACCCACAAGG ATACGGAGAA GCTCTACAAG AATATGATGC ACGTCTTCCA GAAGTATTCG AAAAACTAAA AGAAGATGAT TTATTATTAA TTACAGCAGA CCACGGTAAT GACCCAGTTC ATCATGGTAC TGATCATACA CGTGAATATG TACCATTATT AGCATATAGC CCAAGCATGA AAGAAGGCGG ACAAGAATTA CCACTTCGTC AAACATTTGC TGATATTGGT GCAACTGTAG CAGAAAACTT CGGTGTGAAA ATGCCAGAAT ACGGAACAAG CTTCTTAAAC GAGCTAAAGA AATAG
|
Protein sequence | MNKYKRIFLV VMDSVGIGEA PDAEQFGDLG SDTIGHIAEH MNGLQMPNMV KLGLGNIREM KGISKVEKPL GYYTKMQEKS TGKDTMTGHW EIMGLYIDTP FQVFPEGFPK ELLDELEEKT GRKIIGNKPA SGTEILDELG QEQMETGSLI VYTSADSVLQ IAAHEEVVPL DELYKICKIA RELTLDEKYM VGRVIARPFV GEPGNFTRTP NRHDYALKPF GRTVMNELKD SDYDVIAIGK ISDIYDGEGV TESLRTKSNM DGMDKLVDTL NMDFTGLSFL NLVDFDALFG HRRDPQGYGE ALQEYDARLP EVFEKLKEDD LLLITADHGN DPVHHGTDHT REYVPLLAYS PSMKEGGQEL PLRQTFADIG ATVAENFGVK MPEYGTSFLN ELKK
|
| |