| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A4038 |
|---|
| Symbol | |
|---|
| ID | 7075475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 3776560 |
|---|
| End bp | 3777582 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643452464 |
|---|
| Product | PDZ domain protein |
|---|
| Protein accession | YP_002339975 |
|---|
| Protein GI | 217961407 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000075262 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAGC GTTTTCGGTT TATATATGCA ATTTTAATAG GGGTTATATT GGCAATGTTA
CTTGTTTATG TACGCCTGCC GTATTATGTA ACGAAACCCG GAATGGCTGC CAAATTAGAG
CCTTACGTTC AAGTTGAAGG GGGAACAAAA GAATCAGGTG ATTTTATGCT TGTTACGGTT
TCAATGGGAC CGGCAAATGT AGTGAATTTA ATAGCGGCAC AGTTTAATAA ATATACACAT
ATTTCAAAAG CGGAAGAAAT ATTGCAAAAA GGTGAAAGTG ATGAAGAATA TCAATTTCGC
CAAAATTATG CGATGAAAGA TTCGCAAAAT GCAGCGATTT ATAATGCTTA TAAACGTGCA
AATCGTACTG TTTCTTTTGA AAATAAAGGT GTGTTGGTTG CTGGTGTAGC GAAAGGGATG
CCTTCAGAAG GAAAGCTTAA ACTTGGAGAT GTTATCATTG CCGTCGACGG AAAAACATTT
GAAAAGACAG AACAATTTAT TGAATATATG ACAGGGAAAA AAGAAGGAGA TACAGTAAAT
ATTGAGTACA AGAGGGATGG GAAACAGTTA AAAGAAAATT TAAATGTAAA GACTATTCCG
AATGGAAATG GACGTGTTGG TATAGGTGTT TCTATCGTTA CGGAAAGAGA ATTAGTGGTA
GATCCGAAAG TGAAAATTGA CTCTCATGAA ATAGGCGGAC CATCGGCAGG CCTAATGTTT
ACATTAGAAA TATATAATCA ACTGGTGGAA GATGATTTAA CAAGAGGGCA TGAAATAGCT
GGAACAGGGA CGATCAATGA AAAGGGAGAA GTTGGCCCGA TTGGCGGTAT TCAGCAAAAA
GTGGTTGCTG CAAGTGATGC TGGTGCTGAA GTGTTCTTTG CACCAAATGA AAAAGGTGCA
GAGAAATCGA ATTATAAAGA TGCACTTGAG GCTGCGAAAG ATATTAAAAC GAAAATGAAA
GTTGTGCCAG TTGATACGTT GGATGATGCA TTAATTTATT TGGAAAAAAT GGGAAATAAA
TAA
|
|---|
| Protein sequence | MFKRFRFIYA ILIGVILAML LVYVRLPYYV TKPGMAAKLE PYVQVEGGTK ESGDFMLVTV
SMGPANVVNL IAAQFNKYTH ISKAEEILQK GESDEEYQFR QNYAMKDSQN AAIYNAYKRA
NRTVSFENKG VLVAGVAKGM PSEGKLKLGD VIIAVDGKTF EKTEQFIEYM TGKKEGDTVN
IEYKRDGKQL KENLNVKTIP NGNGRVGIGV SIVTERELVV DPKVKIDSHE IGGPSAGLMF
TLEIYNQLVE DDLTRGHEIA GTGTINEKGE VGPIGGIQQK VVAASDAGAE VFFAPNEKGA
EKSNYKDALE AAKDIKTKMK VVPVDTLDDA LIYLEKMGNK
|
|---|
| |