| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3915 |
|---|
| Symbol | def1 |
|---|
| ID | 7077344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 3671585 |
|---|
| End bp | 3672055 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643452344 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_002339855 |
|---|
| Protein GI | 217961287 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000407704 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTT TAGAAATAGT AAAGCATCCA AATGAAGTGT TAGAAACACC GTGTGAAAGA
GTAATTAACT TTGATAAAAA GTTAGTGAAA TTGTTGAAAG ATATGCATGA AACAATGTTA
ATTGCGGACG GAGTCGGTTT AGCTGCGCCT CAAGTAGGGG TAAGCTTGCA AGTGGCGGTA
GTTGATATCG GTGATGATAC TGGGAAAATT GAGTTAATCA ATCCATCGAT ATTAGAAAAA
CGTGGTGAAC AAGTAGGTCC CGAAGGCTGT TTAAGCTTCC CGGGACTTTA TGGTGAAGTG
GAACGTGCGG ATTATATTAA AGTGCGTGCG CAAAATCGTC GAGGCAAAGT ATTTTTACTA
GAAGCAGAGG GTTTTTTAGC GCGTGCAATT CAACATGAAA TCGATCATTT ACACGGTGTG
TTATTTACAT CGAAAGTGAC AAGATATTAT GAGGAAAATG AATTAGAATA G
|
|---|
| Protein sequence | MAVLEIVKHP NEVLETPCER VINFDKKLVK LLKDMHETML IADGVGLAAP QVGVSLQVAV
VDIGDDTGKI ELINPSILEK RGEQVGPEGC LSFPGLYGEV ERADYIKVRA QNRRGKVFLL
EAEGFLARAI QHEIDHLHGV LFTSKVTRYY EENELE
|
|---|
| |