| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3774 |
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| Symbol | gabP |
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| ID | 7074629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH187 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011658 |
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| Strand | - |
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| Start bp | 3519587 |
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| End bp | 3520981 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643452205 |
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| Product | GABA permease |
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| Protein accession | YP_002339716 |
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| Protein GI | 217961148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000143928 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAA ATCTTAAGAA AGACCTCAAA ATACGCCACA TTACAATGAT CTCAATTGGC
GGCGTAATAG GAGCTGGTTT GTTTGTTGGA AGTGGGGCAG TTGTGCATTC AGCAGGACCA
GGTTCTATCG TTTCATATGC ATTAGCAGGA CTTCTAGTCG TTTTCGTTAT GAGAATGCTT
GGGGAAATGG CAGCTATTAA CCCGACAAGT GGGTCATTTG CAACATATGC AAGAGAAGCA
ATTGGTCCAT GGGCCGGTTA TACAATTGGG TGGCTATATT GGTTTTTCTG GGTAATTGTT
ATTGCAATAG AAGCCACAGC AGGTGCTGGT ATTATTCAAT ACTGGATTCC AGAAATCCCT
CTTTGGTTAT TAAGCCTAAT ATTAACGATT TTATTAACAT TGACGAATGT TTTTTCTGTG
AAATCATTTG GAGAGTTTGA ATATTGGTTT TCTTTTATTA AAGTAATAAG TATTGTTTTG
TTCCTTTGTC TTGGACTAGC TGTTATTTTA GGATTTGTAC CAGGAACGGA AGCACCTGGC
ACTTCGAATT TAGTAGGACA AGGAGGATTT ATGCCAAACG GTATAAGTTC GGTGCTACTT
GGAATTACTG TCGTTATATT TTCATTTATG GGATCTGAGA TTGTTGCAGT AGCTGCTGGA
GAATCTGCTG AACCTGTAAA AGCAGTAAAA ACAGCAACAA ATAGTGTAAT TTGGCGTATT
CTCGTATTTT TCATTGGATC GATTGCTGTA GTTGTTACAC TTCTTCCATG GAATTCAGCG
AACATATTAA AAAGTCCGTT TGTAGCGGTA CTGGAACATA TAGGGATACC AGCGGCAGCA
CAAATTATGA ATTTTATCGT TTTAACAGCT GTACTTTCTT GTTTAAATTC TGGTTTATAT
ACGAACTCAA GAATGCTTTT TTCAATGGCA GAAAGAGGAG ATGCTCCAAA GGCATTTTTG
AAATTGAATA GTAGTGGTGT TCCAGTTCGG GCCGTTTTAT TCGGAACGTT CTTCGCTTAT
ATTGGAGTTG TTTTTAGTTA CATATCTCCA GATAAAGTCT TTTTATTTTT AGTCAATGCA
TCTGGCGGAA TTGCGTTACT CGTTTATCTC GTTATAGCTG TTTCGCATTT AAAGATCCGT
AAAAAAATGG GGAAAGTAGA ACAACAAAAT TTGAAAGTGA AAATGTGGTT TTTCCCGTAT
GTAACGTATG TTACAATTGC CGCTATTATA GCTGTTTTAG TTGCGATGCT TGCAATTGAA
TCTTTACGTT CACAAGCACT TTTGACGATG CTTGTTACTG TTCTTATAAT ACTTTCTTAT
TTTATTTTTA ATAGAAATAA AAATAGTACA GTATCGAATA CTACAAGTAA GAATGAGGAA
TCTGTTCGAT TCTAA
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| Protein sequence | MDKNLKKDLK IRHITMISIG GVIGAGLFVG SGAVVHSAGP GSIVSYALAG LLVVFVMRML
GEMAAINPTS GSFATYAREA IGPWAGYTIG WLYWFFWVIV IAIEATAGAG IIQYWIPEIP
LWLLSLILTI LLTLTNVFSV KSFGEFEYWF SFIKVISIVL FLCLGLAVIL GFVPGTEAPG
TSNLVGQGGF MPNGISSVLL GITVVIFSFM GSEIVAVAAG ESAEPVKAVK TATNSVIWRI
LVFFIGSIAV VVTLLPWNSA NILKSPFVAV LEHIGIPAAA QIMNFIVLTA VLSCLNSGLY
TNSRMLFSMA ERGDAPKAFL KLNSSGVPVR AVLFGTFFAY IGVVFSYISP DKVFLFLVNA
SGGIALLVYL VIAVSHLKIR KKMGKVEQQN LKVKMWFFPY VTYVTIAAII AVLVAMLAIE
SLRSQALLTM LVTVLIILSY FIFNRNKNST VSNTTSKNEE SVRF
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