| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3677 |
|---|
| Symbol | |
|---|
| ID | 7073875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 3425472 |
|---|
| End bp | 3426950 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643452109 |
|---|
| Product | sodium/proline symporter family protein |
|---|
| Protein accession | YP_002339620 |
|---|
| Protein GI | 217961052 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.289137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGATTG AGATTATGGT TTCGCTTGCT ATTTATATGG CAGGTATGTT GTATATCGGT
TATTGGTCTT ATAAGAAGAC ATCCGATTTA TCAGATTATA TGTTAGGCGG AAGGGGACTC
GGTCCAGCAG TTACAGCTTT ATCAGCTGGT GCTTCTGACA TGAGTGGTTG GATGCTAATG
GGATTACCTG GTGCGATGTA TGCGACAGGG TTATCGAGTG TGTGGATTGC GATAGGTTTA
TTAATAGGTG CTTATGTAAA CTATTTAATT CTTGCCCCGC GTTTGCGAAC GTATACAGAA
GTGGCTAATG ATTCAATTAC GATTCCAGAC TTTTTAGAGA ATCGATTTAA AGATCGTACG
AAAATACTTC GTTTTGTCTC CGCTATCGTC ATTTTAGTAT TTTTCACATT TTATGCGTCG
GCTGGTTTAG TATCAGGTGG ACGTTTGTTT GAAAATTCTT TCAACCTTGA TTATAAAATT
GGTTTATTTG TAACTGTTGG TGTCGTAGTT GCTTATACAC TATTCGGTGG TTTTTTAGCA
GTAAGTTGGA CCGACTTTGT GCAAGGGTGT ATTATGTTTA TTGCTCTCGT ATTAGTACCA
ATTGTTGCTT TTACAGATGT CGGTGGTGTA ACAGAAACAT TCAATACGAT TAAGCAAGTT
GATGCATCGC ATTTAGATAT GTTTAAAGGG ACCACAATTC TTGGTATTAT TTCCTTTTTA
GCATGGGGTC TTGGGTATTT TGGTCAACCA CATATTATTG TCCGCTTTAT GGCAATTACC
TCTATTAAAG ATTTGAAAAC TTCTCGTAGA ATCGGTATCG GTTGGATGAC GATTTCAATT
ATAGGTGCAA TGCTTACTGG TCTAGTTGGT ATTGCTTATT ACGCTAAAAA TAATGCGACA
TTACAAGATC CGGAAATGGT CTTTGTAACA TTCTCAAATA TTTTATTCCA TCCGTACATT
ACTGGATTTT TATTATCAGC TATTTTGGCT TCGATTATGA GTAGTATTTC CTCGCAATTA
CTTGTTATTT CAAGTGCAGT AACGGAAGAT TTCTATAAAA CATTTTTCCG TCGTAACGCA
AGTGATAAAG AACTTGTATT TATCGGTAGA CTGTCAGTTT TAGTAGTAGC TATGATCGCA
GTTGTTTTAG CGTATCATCC AAGTGATACA ATTTTAACAC TCGTCGGTTA TGCTTGGGCA
GGATTTGGTT CAGCATTCGG ACCTGCCATT TTATTAAGTT TATATTGGAA GAGAACGAAC
AAATGGGGCG TTCTTGCTGG GATGATTGTT GGTGCAGTAG TTGTAATTAC TTGGGTACAA
ATTCCAAGTT TAAAAGCGAC TATGTATGAA ATGGTACCTG GATTCTTCTG TAGCTTATTA
GCTGTGATTG TTATAAGTTT ATTAACGAAA GAACCAGTTA AAGCAATTCA TCGTGAATTT
AATGAGATGG AAGCAGTGCT GGAAGAAGAA ACGAAATGA
|
|---|
| Protein sequence | MKIEIMVSLA IYMAGMLYIG YWSYKKTSDL SDYMLGGRGL GPAVTALSAG ASDMSGWMLM
GLPGAMYATG LSSVWIAIGL LIGAYVNYLI LAPRLRTYTE VANDSITIPD FLENRFKDRT
KILRFVSAIV ILVFFTFYAS AGLVSGGRLF ENSFNLDYKI GLFVTVGVVV AYTLFGGFLA
VSWTDFVQGC IMFIALVLVP IVAFTDVGGV TETFNTIKQV DASHLDMFKG TTILGIISFL
AWGLGYFGQP HIIVRFMAIT SIKDLKTSRR IGIGWMTISI IGAMLTGLVG IAYYAKNNAT
LQDPEMVFVT FSNILFHPYI TGFLLSAILA SIMSSISSQL LVISSAVTED FYKTFFRRNA
SDKELVFIGR LSVLVVAMIA VVLAYHPSDT ILTLVGYAWA GFGSAFGPAI LLSLYWKRTN
KWGVLAGMIV GAVVVITWVQ IPSLKATMYE MVPGFFCSLL AVIVISLLTK EPVKAIHREF
NEMEAVLEEE TK
|
|---|
| |