| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3030 |
|---|
| Symbol | rocB |
|---|
| ID | 7073540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 2803142 |
|---|
| End bp | 2804782 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643451475 |
|---|
| Product | RocB protein |
|---|
| Protein accession | YP_002338980 |
|---|
| Protein GI | 217960418 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4187] Arginine degradation protein (predicted deacylase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000285775 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGT GGCAATCAAA AGAACAATTG ATTCAATTAT TAAGCGGTCT TGTTGAAATT
CCTAGTATTA CAGGTACAGA AGCTGAAGTG ATATTGCCAG ACTTCGTTGT GGAACAATTA
TCTGATTTAC AGTACTTCAA AGAAAATCCA CACCATTTGC AAAAAAATCC GACGGGCGAT
GGACGATACT TTGTTACAGC ACTAGTAAAG AAAAGTGACA GTACAAAAAA TACCGTAGTT
CTTGTTAGTC ACTTTGATGT TGTAGATGTG CAAGATTACG GCGTGTGGAA AGAAGATGCA
TTTAATCCTA AAAAGTTAAC GTCTATGTTT TATTCTCATA AAGATGAATT ACCAGACCAT
GTACGTGAAG ATATAGAACA AGGAGATTGG CTGTTTGGTA GAGGAACAAT GGACATGAAA
TGCGGCCTCA CGTTACAAAT GGCGATGATT GAGCAAGCCT GTGAAGGAAG ATTTGATGGG
AATGTTCTTT TATTGGCCGT ACCTGATGAA GAAGTAAACT CTGTAGGGAT GAGAGCTGCT
GTTCCAAGAT TATTAGATTT AGCAAGAGAA CATGATTTAG ATTATAAAAC AGTACTAAAT
TCAGAGCCTA TGTTTGCAAG GCACCCTGGT GATCAAAAGA AATATATTTA TACTGGTTCT
ATTGGTAAAG TGTTACCTGG TTTTCTTTGC TACGGAAAAG AGACACATGT AGGTGAACCT
TTTGCGGGCC TAAATGGGAG TTATATGGCT TCATTAATAA CAGCAGAATT AGAGTTGAAT
ACAGACCTTT GTGATATTGT AGAAGGGGAA GCGAGTCCTC CGCCAACTAA TTTACTTCAA
AGGGACTTAA AGGAGGATTA CTCTGTACAA ATTCCGCATC GTGCAGTCAC ATTATTTAAT
TTGTTTTTAT TAGAAAAATC AATGACAGAT GTCGTTTCAT TGCTGCGTCA AAAAGTAACG
AAAGTAGCAG AGAAAATAGA AGAGTCGTAT GAAAAACATG CATATCGTTT TTCTAAATAT
AATCCATTCA TACCACCTAA CCTCAAAGTA AATGTATTAA CGTATGAAGA GCTTATCGCA
TATGCAATTG AACAACATGG GCAAGAGAAA ATAAATGAAA TTCAATCTAG CATTATAAAA
AATAGAGAAG ATAAAGATGA TCGTGCGGTA ACGATTGATT TAGTAGATAA ATTAGCCATC
TTATGTAAAG AAAAAGCACC GATGATTGTA CTTTTCTTTG CTCCGCCATA TTATCCAGCT
GTAAGTTCAC GTAACAACCA ATTAATTAAA GAGGTAGTTG GAGAGATGGA AAAGTATGCA
AACTTCAATC ATAATATTTC ATTTGAAAAC CAAAACTATT TTGGAGGAAT TTCAGATTTG
AGTTATGTGG GCTTACAGAA TCCATTAGAT TCAATGAGTT CACTTGTAGA CAATATGCCA
TTATGGGATA AAGGTTACTC AATTCCACTT CAGGAACTAG AAGAATTTGA TGTTCCAGTT
TTAAATATGG GACCGGTAGG AAAAGATGCA CATCAATGGA CAGAACGTCT AGATGTAAAT
TACGCATTTG AAACGCTATT AGACATGTTA CCGATTTGCA TTGAAAAATT ACTTGTTTCT
AATAAAATTA CACAAGTATA G
|
|---|
| Protein sequence | MSKWQSKEQL IQLLSGLVEI PSITGTEAEV ILPDFVVEQL SDLQYFKENP HHLQKNPTGD
GRYFVTALVK KSDSTKNTVV LVSHFDVVDV QDYGVWKEDA FNPKKLTSMF YSHKDELPDH
VREDIEQGDW LFGRGTMDMK CGLTLQMAMI EQACEGRFDG NVLLLAVPDE EVNSVGMRAA
VPRLLDLARE HDLDYKTVLN SEPMFARHPG DQKKYIYTGS IGKVLPGFLC YGKETHVGEP
FAGLNGSYMA SLITAELELN TDLCDIVEGE ASPPPTNLLQ RDLKEDYSVQ IPHRAVTLFN
LFLLEKSMTD VVSLLRQKVT KVAEKIEESY EKHAYRFSKY NPFIPPNLKV NVLTYEELIA
YAIEQHGQEK INEIQSSIIK NREDKDDRAV TIDLVDKLAI LCKEKAPMIV LFFAPPYYPA
VSSRNNQLIK EVVGEMEKYA NFNHNISFEN QNYFGGISDL SYVGLQNPLD SMSSLVDNMP
LWDKGYSIPL QELEEFDVPV LNMGPVGKDA HQWTERLDVN YAFETLLDML PICIEKLLVS
NKITQV
|
|---|
| |