| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A1983 |
|---|
| Symbol | |
|---|
| ID | 7073986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 1844408 |
|---|
| End bp | 1846036 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643450446 |
|---|
| Product | putative oligopeptide ABC transporter, oligopeptide-binding protein |
|---|
| Protein accession | YP_002337937 |
|---|
| Protein GI | 217959389 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.776942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA AGAAGAGCCG TTTAATGGTA ATGGCACTTG TTACATCTTT ATTATTAACA
GCTTGTAATA ATAAGGAAAA TAAAAGTGAT ACAAAGGCAA AAAAACAAGT ATTAAATGTA
ACAGTATCAG AAGAAATTCC TTCTCTTGAT ACAGCGAAAA CGATGGATGG TACGTCAGCG
CACGTTATGC AAAACATATT TGAAGGATTG TATGCATTAG ATGATCAAGA TCAGCCGATT
CCAGCAGTAG CAAAATCGTT TAAAAGAAGT GAAGATGGTA AAAAATATAC ATTCGATTTG
CGTAAAGATG CAAAATGGTC AAATGGGGAC AATGTGACAG CGCATGATTT TATGTTTGCG
TGGAAACGTG CAATTACCCC TGAAACAGCG TCTCAATATG CGTCCATGCT CTTTTATGTG
AAAAATGCGA AAGAGATTAA TAAGGGGACG ATGCCTCTTG ATGAACTTGG GGTTACAGTT
ATAAATGATT ATAAGTTAGA GGTGGAACTA GAACAGCCAA TTCCTTATTT TTTACAGTTG
TTAGCACTAC CTATATATTT ACCACAGCAT GAATCATTTT TGAAAGAACA AGGAAAAAAT
TATGCATTGG AACCTAATAA TCTTATATAT AACGGTCCAT TTGTATTAGA GAAATGGAAG
CATGAACAAG AGTTTCAATT AAAGAAGAAT GCTACTTATT GGGATGAAAA GAAAGTGAAA
TTAGACGAGA TAAACTTTCA AATTGTAAAG GATACAATGA CCGCTGTTAA TTTATACGAA
GCTGGTAATT TGGACCGGGT GCCTATTAAT TCTCAATTTG TAGACAAGTA TAAAGGGGAT
AAGGAGTTAC ATATGTCGAG CGAACCTGCA ATTGCTATGC TACGTTTTAA TGAAAAAAAT
AGTGCGTTAG CAAATAAGAA AGTGCGTCAG GCTATTTCAT TCGCGTTAAA TAAAGAGGAT
TTCGTTGCTC ATTTTATTAA TAACGGAGCA AAACCTGCAA CTGGGCTAGT ACCAGTTGGG
CATATCAATG AAGAAACGGG AAAAGATTTT AGGGAAGAAA ACGGAAACCT TTCTTTATAT
GATGTACAAA GTGCGAAAAA AAATTGGGAA GAAGCGAAAA AAGAGCTTGG AGTAGAGCAA
GTAAACTTCG AGTTTTTAAC ATTTGAACAA GATAACGCAA AACGTATGGC AGAATATATA
AAAGGTGATT TAGAAAAGAA TTTACAAGGA TTAACGATAC AAATTAAACA ACAGCCATTT
AAGCAAAAAT TACAGTTAGA ACAAACAGGT GATTACGATA TAACTATGGC AAATTGGGGA
CCCGACTATA AAGACCCAAT TAGTTATTTA GAACTATTTA CGACGGGGAA TCCGAATAAT
AAAATGAATT ATTCTAATGT TCGTTACGAT GAATTAATAA AGAAAGCGAA AACGGATTTT
GTACTAGATA CGGAAAACCG ATGGGAAGCG TTGCGAGAAG CCGAGCAGGT ATTATTAGAA
GATGCTGCGG TGGCGCCGCT TTATCATATT GGCTCAGCAT ATGTACAAAA GGATTATGTA
AAAGGAATTG AAAAGCATCA ATTTGGTGGT ATTTATACTT ATAAGAATGC TTATATTGCA
AATGAATAA
|
|---|
| Protein sequence | MKRKKSRLMV MALVTSLLLT ACNNKENKSD TKAKKQVLNV TVSEEIPSLD TAKTMDGTSA
HVMQNIFEGL YALDDQDQPI PAVAKSFKRS EDGKKYTFDL RKDAKWSNGD NVTAHDFMFA
WKRAITPETA SQYASMLFYV KNAKEINKGT MPLDELGVTV INDYKLEVEL EQPIPYFLQL
LALPIYLPQH ESFLKEQGKN YALEPNNLIY NGPFVLEKWK HEQEFQLKKN ATYWDEKKVK
LDEINFQIVK DTMTAVNLYE AGNLDRVPIN SQFVDKYKGD KELHMSSEPA IAMLRFNEKN
SALANKKVRQ AISFALNKED FVAHFINNGA KPATGLVPVG HINEETGKDF REENGNLSLY
DVQSAKKNWE EAKKELGVEQ VNFEFLTFEQ DNAKRMAEYI KGDLEKNLQG LTIQIKQQPF
KQKLQLEQTG DYDITMANWG PDYKDPISYL ELFTTGNPNN KMNYSNVRYD ELIKKAKTDF
VLDTENRWEA LREAEQVLLE DAAVAPLYHI GSAYVQKDYV KGIEKHQFGG IYTYKNAYIA
NE
|
|---|
| |