| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A1376 |
|---|
| Symbol | rfbD |
|---|
| ID | 7074223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 1292622 |
|---|
| End bp | 1293476 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643449854 |
|---|
| Product | dTDP-4-dehydrorhamnose reductase |
|---|
| Protein accession | YP_002337346 |
|---|
| Protein GI | 217958798 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.580619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAC GGATTATCAT AACAGGAGCA AATGGTCAAT TGGGAAAGCA ACTACAAGAA
GAGTTAAATC CTGAAGAATA TGACATATAT CCATTTGATA AAAAGTTACT AGATATAACA
AATATATCCC AAGTGCAGCA AGTGGTACAA AAAATAAGGC CACATATAAT TATTCATTGT
GCAGCGTATA CGAAGGTTGA TCATGCTGAG AAAGAACGAG ATCTTGCTTA TGTAATAAAT
GCAATAGGGG CTCGAAATGT AGCGGTTGCT TCACAATTAG TTGGGGCGAA GTTAGTTTAT
ATTAGTACGG ATTATGTATT TCAAGGCGAC AGACCAGAGG GGTACGATGA ATTTCATAAT
CCGGCGCCGA TAAATATATA CGGGGCTTCT AAATATGCGG GAGAGCAGTT CGTCAAAGAG
TTACATAATA AATACTTTAT CGTTCGTACA TCATGGTTGT ATGGTAAGTA TGGAAATAAT
TTTGTGAAAA CGATGATGCG ATTAGGGAAA GAAAGAGAAG AAGTATCTGT TGTAGCGGAT
CAAATCGGTT CTCCTACGTA TGTGGCGGAT TTAAATATAA TGATTAATAA GCTCATCCAT
ACTTCTTTAT ACGGTACGTA TCACGTATCC AATAGAGGAT CATGTTCTTG GTTTGAATTT
GCAAAGAAAA TATTTTCGTA TGCAAATATG AAAGTGGATG TATTACCGGT TTCAACTGAA
GAATTTGGAT CGGCGGCAGC GAGACCAAAA TATTCTATTT TCCAACATAA CATGCTGCGA
TTAAATGGTT TTTTACAAAT GCCTTCTTGG GAAGAAGGAT TAGAGCGTTT TTTTATAGAA
ACAAAAAGTC ATTAA
|
|---|
| Protein sequence | MKERIIITGA NGQLGKQLQE ELNPEEYDIY PFDKKLLDIT NISQVQQVVQ KIRPHIIIHC
AAYTKVDHAE KERDLAYVIN AIGARNVAVA SQLVGAKLVY ISTDYVFQGD RPEGYDEFHN
PAPINIYGAS KYAGEQFVKE LHNKYFIVRT SWLYGKYGNN FVKTMMRLGK EREEVSVVAD
QIGSPTYVAD LNIMINKLIH TSLYGTYHVS NRGSCSWFEF AKKIFSYANM KVDVLPVSTE
EFGSAAARPK YSIFQHNMLR LNGFLQMPSW EEGLERFFIE TKSH
|
|---|
| |