Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A0133 |
Symbol | rpoB |
ID | 7078467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | + |
Start bp | 114152 |
End bp | 117685 |
Gene Length | 3534 bp |
Protein Length | 1177 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643448649 |
Product | DNA-directed RNA polymerase subunit beta |
Protein accession | YP_002336221 |
Protein GI | 217957677 |
COG category | [K] Transcription |
COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000446144 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAGGTC AACTAGTTCA ATACGGACGC CACCGCCAAC GAAGAAGTTA TGCCCGTATT AGTGAAGTAT TAGAGTTACC AAATCTTATC GAAATTCAAA CCTCTTCTTA TCAGTGGTTT CTTGATGAGG GTTTGCGAGA AATGTTCCAA GACATTTCTC CGATTGAAGA CTTTACGGGA AATCTATCGC TTGAATTTAT CGACTACAGC TTAGGTGAAC CTAAATACTC TGTAGACGAA TGCAAAGAGC GTGATGTGAC GTATGCAGCA CCACTTCGTG TAAAAGTGCG TCTAATCAAC AAGGAAACTG GTGAAGTAAA AGAACAAGAT GTGTTCATGG GAGATTTCCC ACTCATGACA GAGACTGGAA CATTCGTAAT TAACGGTGCA GAACGTGTTA TCGTTTCCCA GTTAGTTCGC TCTCCAAGCG TATACTATAG TGGCAAAGTG GATAAAAACG GAAAACGTGG TTTTACTGCT ACTGTAATTC CAAACCGCGG AGCTTGGTTA GAGTATGAGA CAGATGCTAA GGATGTTGTA TATGTGCGTA TTGACCGTAC GCGTAAACTT CCTGTAACTG TTTTGTTACG CGCATTAGGG TTTGGCTCTG ATCAAGAAAT CACCGAGCTT TTAGGTGATA ACGAATACTT AAGCAACACA TTAGAAAAAG ACAACACAGA TAGCACAGAA AAAGCATTGC TTGAAATTTA TGAGCGTCTA CGTCCTGGTG AGCCACCAAC AGTAGAAAAT GCTAAGAGCT TACTTGTGTC TCGTTTCTTT GATCCAAAGC GCTACGATTT AGCAAATGTA GGTCGCTACA AGATCAACAA AAAGTTACAC ATTAAAAACA GATTGTTTAA TCAACGTTTA GCTGAAACAT TAGTGGATCC AGAAACTGGT GAAATTTTAG CGGCAGAAGG AACAATCTTA GATCGTCGTA CACTTGATCG CATTTTACCT TACTTAGAGA AAAACATTGG ATTCAAAACA GCGAAACCAA TGGGTGGAGT GGTAGAAGGC GATGTTGAGC TGCAATCTAT TAAGATTTAT GCTCCTGAGT CAGAAGGCGA GCGCGTAATT AACGTAATTG GTAATGCAAA TATTACTCGT GATGTAAAAC ACATCACACC AGGTGATATC CTTGCTTCTA TCAGTTACTT CTTCAACCTA CTATACAAAG TAGGGGATAC AGATGATATC GACCACTTAG GAAACCGTCG TCTGCGTTCT GTTGGAGAAC TATTACAAAA TCAATTCCGT ATCGGTCTTT CTCGTATGGA ACGTGTTGTT CGTGAGAGAA TGTCGATCCA AGATACAAAT GCAATTACAC CACAGGCATT AATTAATATT CGTCCTGTTA TTGCATCTAT TAAAGAGTTC TTCGGAAGTT CTCAGTTATC TCAGTTCATG GACCAAACAA ACCCATTAGC AGAGTTAACT CACAAACGAA GACTATCTGC ATTAGGACCT GGTGGTTTAA CGCGTGAGCG CGCAGGCTTT GAAGTACGTG ACGTTCACTA CTCTCACTAT GGTCGTATGT GTCCGATTGA AACACCAGAG GGACCAAACA TCGGTTTGAT TAACTCATTA TCTTCATTCG CGAAAGTAAA TGAGTTTGGT TTCATTGAAA CACCATACCG TCGTGTTGAC CCAGAAACTG GTCTTGTAAC AGGGCATGTC GATTATTTAA CAGCAGATGA AGAAGATAAT TATGTTGTAG CCCAAGCGAA TATGAAATTA TCTGAAGAAG GAGAATTCCT TGATGAAGAT ATCGTAGCTC GTTTCCGTGG TGAAAACATT GTCACAAATA AAGAACGCAT CGACTACATG GATGTATCAC CAAAACAAGT AGTGTCGGCA GCGACAGCTT GTATTCCGTT CTTAGAAAAC GATGACTCTA ACCGCGCACT TATGGGAGCG AACATGCAAC GTCAGGCGGT TCCGTTAATG AATCCGGAAT CACCGATTGT AGGTACAGGT ATGGAGTACG TATCAGCAAA AGACTCAGGT GCTGCAGTAA TCTGTAAACA CCCTGGTATT GTTGAGCGCG TAGAAGCACG TGAAGTTTGG GTACGTCGCT ATGTAGAAGT TGACGGTCAA ACAGTAAAAG GCGACTTAGA TCGCTACAAA ATGCAAAAAT TCATTCGTTC TAACCAAGGA ACTTGCTACA ACCAACGTCC AATCGTAAGT GTTGGAAATG AAGTTGTAAA AGGTGAAATC CTTGCGGATG GTCCTTCTAT GGAATTAGGT GAACTAGCAC TTGGACGTAA CGTGCTTGTT GGCTTCATGA CTTGGGACGG TTATAACTAC GAGGATGCGA TCATTATGAG TGAGCGCCTT GTAAAAGATG ATGTGTATAC TTCTATTCAT ATTGAAGAAT ATGAGTCAGA AGCTCGTGAT ACGAAGCTTG GACCAGAAGA AATCACACGT GATATTCCAA ACGTTGGGGA AGATGCATTA CGTAACCTTG ACGAGCGCGG TATCATTCGC GTTGGTGCGG AAGTAAAAGA TGGAGATTTA CTTGTTGGTA AAGTAACACC TAAAGGTGTA ACAGAATTAA CAGCTGAAGA ACGTCTATTA CATGCTATCT TTGGAGAAAA AGCGCGTGAA GTACGTGATA CATCACTACG TGTACCACAC GGTGGTGGCG GTATTATCTT AGACGTAAAA GTATTCAACC GTGAAGATGG CGACGAATTG CCACCAGGCG TGAATCAACT TGTGCGTGCA TATATCGTTC AAAAACGTAA AATCTCTGAA GGTGACAAGA TGGCCGGACG TCACGGTAAC AAAGGTGTTA TCTCTCGTAT TTTACCAGAA GAAGATATGC CTTACTTACC AGACGGTACG CCAATCGATA TCATGTTAAA CCCATTAGGG GTACCATCTC GTATGAATAT CGGTCAGGTA TTAGAGCTTC ATCTTGGTAT GGCAGCAAGA TACCTTGGCA TTCACATTGC AACACCAGTA TTCGATGGTG CTCGTGAGGA AGATGTTTGG GGCACAATTG AAGAAGCTGG TATGGCAAAT GACGCGAAAA CAATCCTGTA TGACGGACGT ACTGGTGAAC CATTCGATAA CCGTGTATCT GTTGGTGTCA TGTATATGAT CAAACTTGCG CACATGGTTG ACGATAAACT TCATGCTCGT TCTACTGGAC CATACTCACT TGTAACGCAG CAGCCTCTTG GAGGTAAAGC TCAGTTCGGT GGACAGCGTT TCGGTGAGAT GGAGGTTTGG GCACTTGAAG CTTACGGTGC TGCTTATACT CTTCAAGAAA TCTTAACAGT GAAGTCTGAT GATGTTGTTG GACGTGTTAA GACGTATGAA GCAATTGTTA AAGGCGAAAA TGTTCCAGAA CCAGGCGTTC CTGAATCATT CAAAGTATTG ATTAAAGAGC TGCAAAGTTT AGGTATGGAC GTTAAAATGA TGTCTAGCGA CGATACAGAA ATTGAAATGC GTGATACGGA AGATGACGAT GATCATCAAT CAGCAGACAA ATTGAATGTC GAAGTTGAGA CAACTAAGGA ATAA
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Protein sequence | MTGQLVQYGR HRQRRSYARI SEVLELPNLI EIQTSSYQWF LDEGLREMFQ DISPIEDFTG NLSLEFIDYS LGEPKYSVDE CKERDVTYAA PLRVKVRLIN KETGEVKEQD VFMGDFPLMT ETGTFVINGA ERVIVSQLVR SPSVYYSGKV DKNGKRGFTA TVIPNRGAWL EYETDAKDVV YVRIDRTRKL PVTVLLRALG FGSDQEITEL LGDNEYLSNT LEKDNTDSTE KALLEIYERL RPGEPPTVEN AKSLLVSRFF DPKRYDLANV GRYKINKKLH IKNRLFNQRL AETLVDPETG EILAAEGTIL DRRTLDRILP YLEKNIGFKT AKPMGGVVEG DVELQSIKIY APESEGERVI NVIGNANITR DVKHITPGDI LASISYFFNL LYKVGDTDDI DHLGNRRLRS VGELLQNQFR IGLSRMERVV RERMSIQDTN AITPQALINI RPVIASIKEF FGSSQLSQFM DQTNPLAELT HKRRLSALGP GGLTRERAGF EVRDVHYSHY GRMCPIETPE GPNIGLINSL SSFAKVNEFG FIETPYRRVD PETGLVTGHV DYLTADEEDN YVVAQANMKL SEEGEFLDED IVARFRGENI VTNKERIDYM DVSPKQVVSA ATACIPFLEN DDSNRALMGA NMQRQAVPLM NPESPIVGTG MEYVSAKDSG AAVICKHPGI VERVEAREVW VRRYVEVDGQ TVKGDLDRYK MQKFIRSNQG TCYNQRPIVS VGNEVVKGEI LADGPSMELG ELALGRNVLV GFMTWDGYNY EDAIIMSERL VKDDVYTSIH IEEYESEARD TKLGPEEITR DIPNVGEDAL RNLDERGIIR VGAEVKDGDL LVGKVTPKGV TELTAEERLL HAIFGEKARE VRDTSLRVPH GGGGIILDVK VFNREDGDEL PPGVNQLVRA YIVQKRKISE GDKMAGRHGN KGVISRILPE EDMPYLPDGT PIDIMLNPLG VPSRMNIGQV LELHLGMAAR YLGIHIATPV FDGAREEDVW GTIEEAGMAN DAKTILYDGR TGEPFDNRVS VGVMYMIKLA HMVDDKLHAR STGPYSLVTQ QPLGGKAQFG GQRFGEMEVW ALEAYGAAYT LQEILTVKSD DVVGRVKTYE AIVKGENVPE PGVPESFKVL IKELQSLGMD VKMMSSDDTE IEMRDTEDDD DHQSADKLNV EVETTKE
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