| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | UUR10_0178 |
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| Symbol | rpoB |
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| ID | 6983781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011374 |
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| Strand | + |
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| Start bp | 209295 |
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| End bp | 213599 |
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| Gene Length | 4305 bp |
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| Protein Length | 1434 aa |
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| Translation table | 4 |
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| GC content | 30% |
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| IMG OID | 643399753 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002284583 |
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| Protein GI | 209554116 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATA ATAAAAATTA TACTGAGAAA TTTATTACTG ATAAAGTAAC GCGAAGAGAT
TACTCAAAAA TTAAATCTAA TTTTGAAGGA CCAAACTTAC TTGAAATCCA AGTCGAATCT
TTTAAACGTT TTATGGAAAA AGATTTAAAG GAAGTAATTT CTGGTATTTT TCCATTAAAA
TCTCCTCAAG GTAAGTATAC ACTAGCATTT AAAGGTTTAA AAATTAAACA ACCAACAAAA
GATGAAAGTG CTTGTCGTGA TGAAGGTAAA ACATTTGAAA CACCAATTTA TATCGATTTA
GAATTAACAG ATAATTATAC TGGTGAAGTA AAACGTGCAC AACGAAATGC TAAAACTGGT
GAAGATGGTA TTTATTTAGG GGCAATTCCT AAAATGACAG AAAAGGGAAC TTTTGTTATT
AATGGAATTG AAAAGTTTGT TATCTCACAA ATTGTTAGAT CGCCAGGGAT TTATGTACTT
GGTAAATCAA GTATTAAATT AAATGGTTCA CGTAAACGTT TGTTTGAAGG TAAAATTTGT
GAAATTTACC CTTCAAAAGG AACTTTAATG CTTGGATATA TTCCAAAAGA TCGTCATAAC
ATTCAAATTG TTGCCCGTGA TTCATCAGGG GACAATGCGC AAACTTTTTC AATAACTACT
TTATTAAAAG CTTTTGGTTT AACAAGTGCT GAAATTTTAA AAATCTTTAA TAACGAAAAA
GAAATTCGTG AGTCATTAGA AGTTGAAAAA TACTCTCCAG AATATATTTT TGAAAATTCA
CAAGAAAATG AAATTATTTT TAAAATTTAT AGTGATGCAC ACGATATTCA TGAAAAAGCT
GATCGTCGTG AATCAAATAA CAAATTAAGA GAAGAATATA TTGAACAAGG TTCACCACTT
TTATCAAAAT TAAAAGAATT AATTTTTGAT TATGTTGAAA AAAGTGATGA AATTGATGCT
TTATTACACG AAAATAAAGA TGTTGAAGAC GCTAATTTCA TTAAAAATAA CAAAAAATTA
TATGATGAAC GAGAAGAAAT CATTAATTGC ATTATTAGTG AAAAAGCAGC TAAAGACATT
GTTGAATTAT TAGGTATTAA TATTAAAAAT GTTGAAACAC TAAGACATTT AGGTAAAGCT
TCATATCAAC TTGCTTTACA ACAGCATTTC TTTAACAAAC GTCTATATGA TATTAGTAGT
GCAGGACGTT ATAAATTTGA AAAGAAATTA CTATTAAGTG AACGTTTATA TCAAAAAGTA
ATTGCACGTG ATATTATTGA CAAGAAGAAC AATATTTTAA TTCCAAAAGA TACATTAATT
ACTAAAGAAC ATATTGAATT AATTAAAAAA GAATCACGAG ATAAAAACAT TAAGTGAACA
AGAAAAATTA ATTTATTACC AATCGCTTTA GAAACTGAAA TTGAACAATT TTTAGAATAC
GAAAGTATTG CAGTTTATAA AGATAATGAT TTAAGAGATG AAACAACAGA AATTGTTGGT
TTAGCACCAG GTTGCAAACT ACAAACATTA ACTGTAGCTG ATTTAGTAGC AACTACAAGT
TACATTTACA ATTTAAATTA TGAAATTGGT GAATTTGATG ATATTGATCA TTTAGGTAAT
AAACGACTTA AATTAATTCA CGAATTACTA CGTGCACGTA TTGCTACAAG TATGGCTCGT
ATTGAAAAAT TCATTAACGA AAAATTAGCT ATTTCAGATG GTTCAAGCAA TAACATTACT
AATGTTAATG ATAAAGGAAT TGACACAGAA CTTGATCGTG AAGTTGAAGA AAGCGATATG
AGTGATGAAG AAAAGAAAAA AGCAATTAGT GTTAAATCAA TTATTAATAC AAAGCAATTC
CAAAGTCTTG TTAAAGACTT CTTTAATTCA CACCAATTAA TTCAATTTAT TGATCAACAA
AACCCTTTAG CAGAGTTAAC TAATAAACGT CGTATTTCAG CGATGGGACC TGGGGGAATT
AGTCGTGAAG ACCCTAACTT AGATATTCGT GACGTTCACC ACTCTCATTA TTCACGTATT
TGTCCAATCG AAACACCTGA AGGTATGAAT ATTGGGTTGA TTATGTCTTT AGCATCACTT
GCTAAAGTTG ATGAAAATGG TTTTATTGTT GCTCCTTATT ACGTTGTTGA AGATGGTGTC
GTAAAAGAAG AATGCAAATA TTTAACAGCA CATGAAGATG ACAACTATAT TATTGCAGAA
TCATCAGTTC AATTAGATGA AAATAAACGA ATTTTAGATG AACAAGTTGT TGCTCGTTAT
CGTGGTTCAA CAGGTTTATT TAGTCCGCAT GAAGTTGATT TTATTGACAT CGTACCAAAA
CAAGTTGTGT CAATTGCTGC TTCAGCAATT CCTTTCATTG AAAACGATGA TGGGGCACGT
GCTTTAATGG GATCAAACAT GCAACGTCAA GCAACACCTT TAATTAAACC ATATGCACCA
ATTGTGGGAA CAGGTACAGA ATTCAAAATT GCACACGACT CAGGAATGGC TGTTGTTGCT
AAAAATGATG GTGTTGTTGA ATTTGTTGAT AGTCAAAAAA TTGTTATTAA AAACGATAAT
GATAAATTAG ATGAATATAA ATTAATTAAA TATCGTAAGT CAAACCAAGA CACATGTAAT
AACCAAATTC CAATTGTAAA AATTGGTCAA AAAGTTCACA AATCTGAAAC GATTGGTGAT
GGACCTGCAA TGCAAAATGG AGAATTAGCT TTAGGACGTA ACATTCTAGT TGGTTATACA
ACTTGACGTG GTTATAACTT TGAAGACGCA ATTATTATTT CTGAACGTTT AGTTGACCAA
GATGTGTTTA CATCAATCCA TATTGATGAA CATACAATTC AATGTATGAA AACAAAAAAT
GGTGATGAAG AAATTACACG TGATATGCCA AACGTTTCTG ATACTGCCAA ACGTTTCTTA
GATAACCAAG GGATTGTTTT AGTAGGTGCT GAAGTACATG AAGGTGATGT TCTAGTTGGA
AAAACAACAC CGCGTGGAAA TGTTGAAACT GCTCCAGAAG ATCGTTTATT ACAAACAATT
TTTGGTGATA AATCAAAAAC AGTTAAAGAC TCATCTCTAA AAGTAAAACA TGGTCAAGAA
GGTATTGTTG CAGCTGTTAA AAGAATTAAA TCAACTGATG AAAATGGTAG CGAATTACCA
GATGACGTTA TCGAAATTAT TAAAGTTTAT ATTGTTCAAA AACGTAAAAT CCAAGTTGGG
GATAAAATGG CTGGACGTCA TGGTAACAAA GGGATTGTTT CAAAAGTTGT ACCAATCCAA
GATATGCCTT TCTTAAAAGA TGGAACACCA CTTGATATCA TGCTAAACCC ATTAGGTGTA
CCTAGTCGTA TGAACATTGG CCAAATTTTA GAATTACACT TAGGTTATGC TGCTGCTGAA
ATTGGTAAAA AACAATTAAT TCAAATTGCT ATTGATCAAT TAGGTTATGA AAAATATATT
TCATTATTTG GAATTAATGA AATTATCGCT AAAAAGCTTT ATGAAAAGAT TACTAATTTA
ATTAAACATA AACAAGCAAA ACAACCAAAA GATATTGATC TAATCGATAT TACTATTGTT
TTAAAAGAAT TAGGACTATC ATATGATGAT ATTGGAATTA AAATTTCAAC ACCAGTATTT
GATGGTGCTA ACCATGATGA CATTGTTGAT ATTATGAATG AAGCAAACAT TGATATTGAA
AACAATAAAG GAAAACAAGT TTTATATGAT GGAAGAACTG GAGAAGCTTT TGATGGTTTA
ATTTCAGTTG GATTAACATA CATGTTGAAA CTAGACCATA TGGTTGATGA TAAGATTCAT
AGTCGTTCTG TTGGTCCATA TAGTAAGATT ACACAACAAC CATTAGGTGG TAAATCACAA
AATGGTGGTC AACGTTTTGG TGAAATGGAA GTTTGAGCTT TAGAAGCTTA TGGTGCAGCC
TATAACTTAT TAGAAATTCT AACTATTAAA TCAGATGATG TTCAAGGCCG TAATCAAGCA
TATAATGCAA TTATAAAAGG TCATGATGTT GTTGCTGATG GAATGCCAGA ATCATTTAAA
TTACTAACAA AACAAATGCA AGGGTTAGGA TTGTGTATTA CTGTTGAAAC AAAAGATGAT
CGTATGATCG ACATTAACGA GTACACACTA AACCAAAATC GTTTAAATAA TGACGATGAT
GAAGTTATTT TTGATGAAAG TATTAAAGAA ATTAATGAAA ATAATCAACA AGTATTTAAT
ACAGACTTTA ATGATAACGA TTATGATGAT GAAGAAAACT TCTAA
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| Protein sequence | MQNNKNYTEK FITDKVTRRD YSKIKSNFEG PNLLEIQVES FKRFMEKDLK EVISGIFPLK
SPQGKYTLAF KGLKIKQPTK DESACRDEGK TFETPIYIDL ELTDNYTGEV KRAQRNAKTG
EDGIYLGAIP KMTEKGTFVI NGIEKFVISQ IVRSPGIYVL GKSSIKLNGS RKRLFEGKIC
EIYPSKGTLM LGYIPKDRHN IQIVARDSSG DNAQTFSITT LLKAFGLTSA EILKIFNNEK
EIRESLEVEK YSPEYIFENS QENEIIFKIY SDAHDIHEKA DRRESNNKLR EEYIEQGSPL
LSKLKELIFD YVEKSDEIDA LLHENKDVED ANFIKNNKKL YDEREEIINC IISEKAAKDI
VELLGINIKN VETLRHLGKA SYQLALQQHF FNKRLYDISS AGRYKFEKKL LLSERLYQKV
IARDIIDKKN NILIPKDTLI TKEHIELIKK ESRDKNIKWT RKINLLPIAL ETEIEQFLEY
ESIAVYKDND LRDETTEIVG LAPGCKLQTL TVADLVATTS YIYNLNYEIG EFDDIDHLGN
KRLKLIHELL RARIATSMAR IEKFINEKLA ISDGSSNNIT NVNDKGIDTE LDREVEESDM
SDEEKKKAIS VKSIINTKQF QSLVKDFFNS HQLIQFIDQQ NPLAELTNKR RISAMGPGGI
SREDPNLDIR DVHHSHYSRI CPIETPEGMN IGLIMSLASL AKVDENGFIV APYYVVEDGV
VKEECKYLTA HEDDNYIIAE SSVQLDENKR ILDEQVVARY RGSTGLFSPH EVDFIDIVPK
QVVSIAASAI PFIENDDGAR ALMGSNMQRQ ATPLIKPYAP IVGTGTEFKI AHDSGMAVVA
KNDGVVEFVD SQKIVIKNDN DKLDEYKLIK YRKSNQDTCN NQIPIVKIGQ KVHKSETIGD
GPAMQNGELA LGRNILVGYT TWRGYNFEDA IIISERLVDQ DVFTSIHIDE HTIQCMKTKN
GDEEITRDMP NVSDTAKRFL DNQGIVLVGA EVHEGDVLVG KTTPRGNVET APEDRLLQTI
FGDKSKTVKD SSLKVKHGQE GIVAAVKRIK STDENGSELP DDVIEIIKVY IVQKRKIQVG
DKMAGRHGNK GIVSKVVPIQ DMPFLKDGTP LDIMLNPLGV PSRMNIGQIL ELHLGYAAAE
IGKKQLIQIA IDQLGYEKYI SLFGINEIIA KKLYEKITNL IKHKQAKQPK DIDLIDITIV
LKELGLSYDD IGIKISTPVF DGANHDDIVD IMNEANIDIE NNKGKQVLYD GRTGEAFDGL
ISVGLTYMLK LDHMVDDKIH SRSVGPYSKI TQQPLGGKSQ NGGQRFGEME VWALEAYGAA
YNLLEILTIK SDDVQGRNQA YNAIIKGHDV VADGMPESFK LLTKQMQGLG LCITVETKDD
RMIDINEYTL NQNRLNNDDD EVIFDESIKE INENNQQVFN TDFNDNDYDD EENF
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