| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | UUR10_0063 |
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| Symbol | rnr |
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| ID | 6984230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011374 |
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| Strand | + |
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| Start bp | 77591 |
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| End bp | 79756 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 4 |
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| GC content | 27% |
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| IMG OID | 643399640 |
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| Product | ribonuclease R |
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| Protein accession | YP_002284476 |
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| Protein GI | 209554185 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATT TAACGAAACA AACTATTATC GAAATAATTT CTAAAGAAGA GCGACCTATT
CCAGCTGCGA TTCTTGCTAA AAAAGTGTTA GAAAAAACAC CAACATTAAA TAAAACAAAT
ATTTATAAAC TAATTGATTT ATTAATTGAA GAAAACACTA TTAAAAGATT AGAAAATAAC
CGTTTAGTTC TTGGTTATTT AGATTATGAA TTTGATCATG AAATAAAACA AGGTACAATT
ACAATCAATT CAAAGGGTGA TGGCTTCATT AAAGAAGATG GCACTGAAAT TGAATATTAT
GTTAACAAAA AATATTTAAA TGGTGCTTTA AAAAAAGATT TAGTTAAATT TGTAAAACTA
AAAAAAGAAC CAAAAAACAA TCTTGAAGAT GCTGCTGTAA TTGAAGTTGT TGAACATGCT
AAAGATCATT ATGTTGGTCA ATTCGTTACT CTACCAAATG GTGGTTATTA CATTGTCGTT
GATGATCCTT TATTTTATTT AAATATAAGT TTAAAAGACA CAACTGGCTT AGTTAATGGC
CATAAAATTC TTTTTAAAAT CATTTCACAA ACAACAAAAG ACGCAGTTGC TGAACTAGTA
CATATAATCG GTCATAAAAA CGACGTTGGT TCTGATATTT TATCAATCGT TTATGATAAT
GGAATTGATC CTATTTTTAA TCCAGATGTT GTTGATTTAG CTTCTAAATT AGAATTTCAT
GTTGATGAAC ATCAAAGTAA AATTCGACGT TCTATAATTG ATCGTGAAAT TGTTTCAATT
GATCCAGTTG GTTCAAAAGA TATTGATGAT GCAGTTTATG TTAAAAAACT AAATGATAAT
CGTTATTTTT TAGGTGTTTC AATTGCTGAT GTTAGTTTTT ATGTTCAGCC AAATACTATT
TTAGATGAAG ACGCTTTTAA AAGAGGTACA TCAACTTATT TAGTTGATCA TGTTATTCCA
ATGTTGCCTC ACAATATATC TAATAATATT TGTTCATTAA ATGAAGGTCA ATTTCGAATG
TGTGTAACAT GCGATATGAT AATTGATAAA AATGGCAAAA TTTGTTGACA AGATGTTTAT
CCTGCAATCA TGAAAAACTA TCGTCAAATG TCATATGATG AAGTTAATGA TTTTTTTGAA
GAAAAATCAC GTTTTGAATC AGCAACGTTA ACAATGAAAG AAATGTTGCT AGAAGCAAAA
GAACTACACC ATATTTTAAG AAATAAAAAA ATTAAAGATG GTTATGTTGA TTTTGATATT
AAAGAACCAA AAATAATCTT AAATGAGCAA GGTGTTCCAG TTGATATTAA AATCTATGAA
CGTAAAACTG CTCAGATGAT GATTGAAGAT TTTATGATTG CTGCTAATGA AGCTGTGACA
ATGTTCGCTG AACAACAAAT GAGTCAAACA CTAAAAGAAT TTAATTTAGA AATGCCTTTT
ATTTATCGTG TACATGACAA ACCTTCAATT ATTAATTTAC AAAAATTTGA AGTTGAAGCT
AAAAAATTAA GTTTTAATAT TTCACATGAT TTTGAAAATA TTCAACCTAA CACTATTTCT
AATTGATTAA AAATGAATGA TAATCATGCT AATTTACCAC TAATTAGTAA ACTATTATTA
CGTTCAATGG CTAAAGCTTC ATATGAAATT ATTAATACTG GTCACTTTGG TTTAGCATCA
GAAAATTACA CACACTTTAC TTCACCAATC CGGCGTTACC CTGATTTAAT TGTGCATCGT
TTATTATGAA TGTTTGTTTT TGATCCTCAA AGTTATACAG ATAAACAACG AACTGAATTA
GTTAATAAAT TAAAATTAAT TACTGAAGAA TCAAATAAAA ATGAAGTCAT TGCTGTTAAA
ACAGAACGTG ATGTTAACGC TGCTAAGTTT GCAGAATACA TGAATTTACA TATTGGTAAA
GAATTTGTAG GTGTAGTTAC TACTGTTTCT AGTTTTGGGC TTTTTGTTGA ACTTGAAAAT
ACAATTGAAG GTTTAATTAG AATTAAAAAT TTAAAAGATG ATTTTTATGA TTTTATTCCT
GAAAATATGA CATTAGTTGG TCAAAAAAGA AATAAAGTCA TTACTGTTGG TAATAAAGTG
CGTGTTCGTG TTATTGAAGC TAATAAAACA ACAAGAAAAA TTGATTTTGA ATTAGTTGCT
CAATAA
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| Protein sequence | MSDLTKQTII EIISKEERPI PAAILAKKVL EKTPTLNKTN IYKLIDLLIE ENTIKRLENN
RLVLGYLDYE FDHEIKQGTI TINSKGDGFI KEDGTEIEYY VNKKYLNGAL KKDLVKFVKL
KKEPKNNLED AAVIEVVEHA KDHYVGQFVT LPNGGYYIVV DDPLFYLNIS LKDTTGLVNG
HKILFKIISQ TTKDAVAELV HIIGHKNDVG SDILSIVYDN GIDPIFNPDV VDLASKLEFH
VDEHQSKIRR SIIDREIVSI DPVGSKDIDD AVYVKKLNDN RYFLGVSIAD VSFYVQPNTI
LDEDAFKRGT STYLVDHVIP MLPHNISNNI CSLNEGQFRM CVTCDMIIDK NGKICWQDVY
PAIMKNYRQM SYDEVNDFFE EKSRFESATL TMKEMLLEAK ELHHILRNKK IKDGYVDFDI
KEPKIILNEQ GVPVDIKIYE RKTAQMMIED FMIAANEAVT MFAEQQMSQT LKEFNLEMPF
IYRVHDKPSI INLQKFEVEA KKLSFNISHD FENIQPNTIS NWLKMNDNHA NLPLISKLLL
RSMAKASYEI INTGHFGLAS ENYTHFTSPI RRYPDLIVHR LLWMFVFDPQ SYTDKQRTEL
VNKLKLITEE SNKNEVIAVK TERDVNAAKF AEYMNLHIGK EFVGVVTTVS SFGLFVELEN
TIEGLIRIKN LKDDFYDFIP ENMTLVGQKR NKVITVGNKV RVRVIEANKT TRKIDFELVA
Q
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