Gene Rleg2_6580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6580 
Symbol 
ID6983649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp255065 
End bp256210 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content62% 
IMG OID643399575 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002284331 
Protein GI209552416 
COG category[R] General function prediction only 
COG ID[COG4134] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.384654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.213985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGC GTGAATTTCT GATCACTTCG TCGGCTGCGG CCGGTCTTCT GGCCTTTCCG 
CGCTTCGCAT CGGCGGCGGC CGGCACGATC GATCTCTACA GCGGTTCGGA TGCCAACATC
ATCGACCTCT GGAACAACAT CATCCGCCCG GCCTTCCAAA AGGCGCATCC TGAAATCGCC
CTGAAGGTGA CCGATGCCGG CGACAATAAC GGCCTGCGCG CCATCGCCGA CCGCGCGCTC
GCGGCGCTGA AGACCAAAAC CGATCCGCAG GCCGATCTTT TCGAGCAGTT CGATCCGCGC
CTGCCGGCGG GCGGCATCGA TGCCGGCCTC TGGGTGAAAC TGTCCGCCGA GAACATCGAA
GGCTATGACC ATATCAATCC GCTCGCCCTC GATACCCCCT ACTCGCTTCC CTATCGCGGC
TCGCAGGTCC TGCTCGCCTA CGACACGACC AAGCTCGATC CGAAGGATGC GCCGAAGAGC
TGGGAGCAGC TCACCACCTG GATCAAGGCC AATCCGGGCC AGTTCATCTA TAACAGACCC
GACAAGGGCG GTTCGGGCAG CAACTTCGTC CGCCGCGCCA TTCATGAGGT GAACGGCCGC
GATCCGAAGA AATTCAAGGT CGACAATTAC ACGGCGGATT ACGGCACCGA GGCGCTGACG
CCGGCCTGGA AGATCCTCAA TGACCTCGCC CCTTCGCTCT ATGACAAGGG CGCCTATACA
TCCGGCAACA CCCAATCGAT CCAGCTGCTT GCCCAGGGTG TCGTCACCAT GGTGCCTGTC
TGGTCGGATC AGGTGCTGCA GGCGATCGCC CAGGGCGTGC TGCCCGAGAC GACCGGCCTG
GTGCAGCTTG GCGATCTCGC CCTTTGCGGC GGCTTCTCCA GCATCACCGT CTTCTCGAAC
GGCGCCAACA AGGATGCGGC GCTGAAGCTT GCCGCCTTCA TGCTGACGAA GGAGATGCAG
GAAGCGATCA TCACCCAGAT CGGCGGCTTC CCCGCCATCT CCTGGGATCA TATCTCCGAC
GATCTGCGCA AGAAATATGC CGACGTCATT CCATCGACCA TCCCGACCTT CCCGAGCGGC
GATTGGGAAA AGGCGATCAA CGACGGCTGG TACCGCAGCG TCGCTCCCGG TATCAGCCGC
ACCTGA
 
Protein sequence
MNRREFLITS SAAAGLLAFP RFASAAAGTI DLYSGSDANI IDLWNNIIRP AFQKAHPEIA 
LKVTDAGDNN GLRAIADRAL AALKTKTDPQ ADLFEQFDPR LPAGGIDAGL WVKLSAENIE
GYDHINPLAL DTPYSLPYRG SQVLLAYDTT KLDPKDAPKS WEQLTTWIKA NPGQFIYNRP
DKGGSGSNFV RRAIHEVNGR DPKKFKVDNY TADYGTEALT PAWKILNDLA PSLYDKGAYT
SGNTQSIQLL AQGVVTMVPV WSDQVLQAIA QGVLPETTGL VQLGDLALCG GFSSITVFSN
GANKDAALKL AAFMLTKEMQ EAIITQIGGF PAISWDHISD DLRKKYADVI PSTIPTFPSG
DWEKAINDGW YRSVAPGISR T