Gene Rleg2_6571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6571 
Symbol 
ID6983640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp245889 
End bp246791 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID643399566 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002284322 
Protein GI209552407 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00340356 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.297177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAACC CTGCAAAATC CATTCGCATC GGCACCATGG TCAGCGGCAA CAAGGGCGAT 
GCCGCCACGC GCATCGGCGA GATCGCCGAC ATGGGCTTCG AAAGCTTCGA ACCCTTCTTC
TGGCAGACGA CCAAGGGCCA GAACCTTGCC GAACTCGGCA AACGCTGCCT CGACGCGATC
GGCGACCGCG ACATCACCAT CTCGACACTC GGCATGTTCG GCAATCCGCT GGAAGAGAGC
GCCATCGACC TCGAGACGCT GCAGGGCTGG AAGGACTGCA TCGACAATGC CCATCATTTC
GGCGCGACCT GCGTTGCCGG CTTCACCGGC CGCGTCCGCG GCAAGCCGCT GACCGACAGC
CTGGCGCGTT ACAAGCAGAT CTGGAGCGAG CTTGCCAAGC GCGCCGCCGA CAAGGGTATC
AAGATCGCCT TCGAAAATTG CGCCATGGAC GGCAACTGGC AAAGCGGCGA CTGGAACATC
GCCCACAATC CGGATGCCTG GGAACTGATC TTCAACGAGA CGCCGGATGA TCATATCGGG
CTGGAATGGG AGCCGTGCCA TCAGATGGTC TATCTGATCG ACCCCATGCC GCAGATCCGC
AAATGGGCGC ACAAGTTCTT CCACGTCCAC GGCAAGGACG CGACCATCCG CTGGGAGGTC
ATCAAGGAAC ACGGCATTTT CGGCAAGGAA AAATTCGTCT TCATGCGCAC GCCGGGCTTC
GGCGACAGCA ACTGGACCGA CATCATTTCC GAGCTGCGGC TTGCCGGCTG GTCCGGCTCG
ATCGACATCG AAGGCTGGCA TGACCCGGTC TATCGCGACG AACTCGAAAT GACCGGCCAG
GTCTATGCGC TCAACCACCT CAAGCATGCC CGGGGCGGCG AATTCGTCGT CGATCCGGCC
TAA
 
Protein sequence
MSNPAKSIRI GTMVSGNKGD AATRIGEIAD MGFESFEPFF WQTTKGQNLA ELGKRCLDAI 
GDRDITISTL GMFGNPLEES AIDLETLQGW KDCIDNAHHF GATCVAGFTG RVRGKPLTDS
LARYKQIWSE LAKRAADKGI KIAFENCAMD GNWQSGDWNI AHNPDAWELI FNETPDDHIG
LEWEPCHQMV YLIDPMPQIR KWAHKFFHVH GKDATIRWEV IKEHGIFGKE KFVFMRTPGF
GDSNWTDIIS ELRLAGWSGS IDIEGWHDPV YRDELEMTGQ VYALNHLKHA RGGEFVVDPA