Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6571 |
Symbol | |
ID | 6983640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011371 |
Strand | + |
Start bp | 245889 |
End bp | 246791 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643399566 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002284322 |
Protein GI | 209552407 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00340356 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.297177 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAACC CTGCAAAATC CATTCGCATC GGCACCATGG TCAGCGGCAA CAAGGGCGAT GCCGCCACGC GCATCGGCGA GATCGCCGAC ATGGGCTTCG AAAGCTTCGA ACCCTTCTTC TGGCAGACGA CCAAGGGCCA GAACCTTGCC GAACTCGGCA AACGCTGCCT CGACGCGATC GGCGACCGCG ACATCACCAT CTCGACACTC GGCATGTTCG GCAATCCGCT GGAAGAGAGC GCCATCGACC TCGAGACGCT GCAGGGCTGG AAGGACTGCA TCGACAATGC CCATCATTTC GGCGCGACCT GCGTTGCCGG CTTCACCGGC CGCGTCCGCG GCAAGCCGCT GACCGACAGC CTGGCGCGTT ACAAGCAGAT CTGGAGCGAG CTTGCCAAGC GCGCCGCCGA CAAGGGTATC AAGATCGCCT TCGAAAATTG CGCCATGGAC GGCAACTGGC AAAGCGGCGA CTGGAACATC GCCCACAATC CGGATGCCTG GGAACTGATC TTCAACGAGA CGCCGGATGA TCATATCGGG CTGGAATGGG AGCCGTGCCA TCAGATGGTC TATCTGATCG ACCCCATGCC GCAGATCCGC AAATGGGCGC ACAAGTTCTT CCACGTCCAC GGCAAGGACG CGACCATCCG CTGGGAGGTC ATCAAGGAAC ACGGCATTTT CGGCAAGGAA AAATTCGTCT TCATGCGCAC GCCGGGCTTC GGCGACAGCA ACTGGACCGA CATCATTTCC GAGCTGCGGC TTGCCGGCTG GTCCGGCTCG ATCGACATCG AAGGCTGGCA TGACCCGGTC TATCGCGACG AACTCGAAAT GACCGGCCAG GTCTATGCGC TCAACCACCT CAAGCATGCC CGGGGCGGCG AATTCGTCGT CGATCCGGCC TAA
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Protein sequence | MSNPAKSIRI GTMVSGNKGD AATRIGEIAD MGFESFEPFF WQTTKGQNLA ELGKRCLDAI GDRDITISTL GMFGNPLEES AIDLETLQGW KDCIDNAHHF GATCVAGFTG RVRGKPLTDS LARYKQIWSE LAKRAADKGI KIAFENCAMD GNWQSGDWNI AHNPDAWELI FNETPDDHIG LEWEPCHQMV YLIDPMPQIR KWAHKFFHVH GKDATIRWEV IKEHGIFGKE KFVFMRTPGF GDSNWTDIIS ELRLAGWSGS IDIEGWHDPV YRDELEMTGQ VYALNHLKHA RGGEFVVDPA
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