Gene Rleg2_6563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6563 
Symbol 
ID6983633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011371 
Strand
Start bp238945 
End bp239991 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content63% 
IMG OID643399559 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002284315 
Protein GI209552400 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.32007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCC TCGCACGGCT TGCACTGTCT GCCGCCGTCA TTCCGTTCAT TTTCATTCAC 
GGTGCAAAGG CCGACGGCCT GTCCGGTGCT CCGGCGCCCT TCGACAAGGG CGGCGTCAAG
GTGGCGCTGA TCAGCTACAT CTCGGCCGGC GATTTCTTCC AGGCATATCA GGCGGGCGCC
GAGGCCCAGG CCAAGGCGCT TGATATCGAC CTGCGCATCT TCCCCGGGCG CCAGGATGCA
GCCGAGCAGC GCGAACAGAT CCTGCAGGCG ATCAATCTCG GCGTCTCCGG CATCGTCATC
GACCATGGCC TGCCGGAATC GCTTGGCGAT GTCGTGCAGC AGGCGCTCGA CAAGGGCATC
AAGGTCGTCG CCTTCGACGT CAACCTCAAC AATCCCAAAA TCCCGCAGGT GGAGCAGAGC
GACCACGAGC TTGCCTCGCT GGCGCTCGAA CAGGTGGTGA AGGACAACGG CAAGAGTTTT
AACGCCGGTT ACGTCTATGT CGCGGGCTTT GCGCCACTCG ATCGCCGCAA CGAGGTTTGG
GACAAATTCA AGTCGGAGAA TGCGGGCGTC GTCGAAAAGG CCCGCTTCGG CAATGTCAGC
GACACCACCG CGACCTCGAC TGCCGACCAG GCGAAGGCCG CGCTCACTGC CAATCCGGAT
ATTTCGGTGG TCTTCGCCCC CTATGACGAA TTCGCCCGCG GCGTAAAACT CGCCGCCAAC
GATCTCGGCA TATCGAAGAA ACTCAAGATC TATTCGGCCG ACGTCTCCAC AGCCGATATC
CAGGAGATCA CCGAGGAAGG CAGCCCGTGG GTTGCGACCG TCGCCACCAA TCCGGCCGTC
GTCGGCGCCG TCTCCATCCG CGCCGCCGCC CTCGAAATCG CCGGCCAGAC GGTTCCTCAC
CAGATCACCG TCAAACCGAC GCTGCTGACC CAGGAGAGCC TGCGCGCGGC CGGCGTCAAG
ACGATCGAGG ATCTGGCGCA GAAGATCCCG GCCTTCAGCA CCAGCGATGC GGCGACCGCC
AGCTGGATCC CCGACAAGCT GTTCTGA
 
Protein sequence
MKSLARLALS AAVIPFIFIH GAKADGLSGA PAPFDKGGVK VALISYISAG DFFQAYQAGA 
EAQAKALDID LRIFPGRQDA AEQREQILQA INLGVSGIVI DHGLPESLGD VVQQALDKGI
KVVAFDVNLN NPKIPQVEQS DHELASLALE QVVKDNGKSF NAGYVYVAGF APLDRRNEVW
DKFKSENAGV VEKARFGNVS DTTATSTADQ AKAALTANPD ISVVFAPYDE FARGVKLAAN
DLGISKKLKI YSADVSTADI QEITEEGSPW VATVATNPAV VGAVSIRAAA LEIAGQTVPH
QITVKPTLLT QESLRAAGVK TIEDLAQKIP AFSTSDAATA SWIPDKLF