| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6336 |
|---|
| Symbol | |
|---|
| ID | 6983409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | - |
|---|
| Start bp | 288452 |
|---|
| End bp | 289291 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643399338 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002284094 |
|---|
| Protein GI | 209552178 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.932988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATCG TACACTCTCC GGGTACCCGC GTCGCCGTCA GCCTGGGCGT CGATTTCGAC
GCCCACACAG TGTGGGAGGG ATCGTTTGGG TTCTCTTCCC CTTCCTATCT CTCAAGGGGG
GAATTCTGCG CTGAAGTGGC TACGCCACGC CTGCTTGATC TCTTCAGAAA AAACGATATC
CGGACGACCT GGTGCACTCC CACTCACACG ATGGAGACAT TTCCGGGTAG CATCGAAAAA
ATCCTTCATC AGGGTCACGA GATCGCTGCG CACGGGTGCC GGCACGAAAA GATCGGCCCC
CTGGAGGAAG AGGAAGAGCG AAGTCTTCTC GATCAGCAGA TGGAGCTTCA CACGCGCTAT
GTCGGGAGAA AACCCAGGGG ATACCGATCG CCATCCTGGG ATTTCAGTCC GAACACGCTT
TCGCTGCTTG AAGAGTTCGG GTTCGACTGG GACTCTTCGC TGATGGGACG GGATTTCGAG
GTTTACCGAC CTCGGCCAAT GCACAAGAGC GAGAGCGGTC CGCATGTCTT TGGTGAACCC
AGTTCGATTA TTGAAATTCC TGTTTCGTGG TGTCTCGATG ATTTTCCCGC GCTAGAGTAC
GTCTCCCGTG TCAATCCCGG GTTGGCAAGC ACGGACGTTA CCTATCAGCG TTGGAAGGAC
CACTTCGATT TTGCCTACGA CGAGGTTCCC AACGCCGTCT TGGCTTTGAC CGTCCACCCG
CAGACGATCG GGCGCGCATC AAACTTCATG ATGTTCCGGC GGCTGATCGA TTACATGAGA
TCGAAGGACG GCGTAGCGTT CATGACACTC AGCGAAATCT GCGACACCTG GAAAGATTGA
|
|---|
| Protein sequence | MPIVHSPGTR VAVSLGVDFD AHTVWEGSFG FSSPSYLSRG EFCAEVATPR LLDLFRKNDI
RTTWCTPTHT METFPGSIEK ILHQGHEIAA HGCRHEKIGP LEEEEERSLL DQQMELHTRY
VGRKPRGYRS PSWDFSPNTL SLLEEFGFDW DSSLMGRDFE VYRPRPMHKS ESGPHVFGEP
SSIIEIPVSW CLDDFPALEY VSRVNPGLAS TDVTYQRWKD HFDFAYDEVP NAVLALTVHP
QTIGRASNFM MFRRLIDYMR SKDGVAFMTL SEICDTWKD
|
|---|
| |