Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6321 |
Symbol | |
ID | 6983394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | - |
Start bp | 271909 |
End bp | 272979 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643399324 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002284080 |
Protein GI | 209552164 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.374689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT ACCTACTTGC CACCACTATG ATCGTGTCGA TCGCAACCGC AGCGCGGGCC GATGTCGTTG TGATGTCATG GGGTGGCGAC TACGGTGCCG GACAGATCGC TGCCTTCAAC AAGCCGTTTA CGGAGCAGAC CGGGATCAAA TCCAGCATGG TCGATTCCGA TAACCCGACA GCGCTGATCA AGTCCATGGT TGAAGCCAAA AACGTGACCG TCGACGTCGT TGAAGTCGAG TATCCCGATG CGATCCGCGG ATGCGACGAG GGCCTGCTCG AACCCGTCGA TCCCGCCATC CTCCCGGCAG GCTCAGACGG AACCGCTGCC AACGACGACT TCATGAAAGG CGCGGTCACC GAGTGCGGCG TAGCGACAGT CGTCTATTCA TGGGTCTTTG CCTACGACAA CAAAAAATTC ACTGACGGTC CGAAGACCGT AGCGGACTTC TTCGACACCA AAAAATTTCC GGGAAAACGC GCTCTTCGGA AACAGCCGAA ATTCGCACTT GAAATGGCGC TTATCGCCGA CGGAGTTTCC ACGGCGGATG TCTACAAGGT CCTCAATACC AAAGAAGGCG TTGACCGTGC CTTCGCAAAG CTCGGCACGG TGAAGGGCGA CTTGATCTGG TACCAGGCGA ATGCGGAGGC AGCACGCTTG CTGGCAGATG GAGAGGTAGT GATGTCTTCG GGCTCCGCAA ACCGCTTCTT CAACGCCGCA GTATCCGAAG GGAAGCCCTT CACCACAGTG TGGGACGGGC AAATCTACGA CTTTGCCATG TTCGTAATTC CCAAGGGAGC TCCGCATCTC GACGAAGCGA AGAAGTACTT GGCCTTCGCA ACTGACACGA AGCAGCTTGC CGCGATGGCC ACGGAACTTC CTTTCGGTCC AGCAAGAATG TCTGCGGTCC CGCTCGTGCA TTTCTTCAAA GACGGAAAGA CCGACATTCG CCCGCACATG CCCACTAACC CCGACAACCT GAAGAACGGT CTCGCCGTGT CTTCGGATTT CTGGGCCGAT CACGAAGCCG AATTGACGGA GCGCTTCAAC GCGTGGCTCG CCACGAATTG A
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Protein sequence | MKKYLLATTM IVSIATAARA DVVVMSWGGD YGAGQIAAFN KPFTEQTGIK SSMVDSDNPT ALIKSMVEAK NVTVDVVEVE YPDAIRGCDE GLLEPVDPAI LPAGSDGTAA NDDFMKGAVT ECGVATVVYS WVFAYDNKKF TDGPKTVADF FDTKKFPGKR ALRKQPKFAL EMALIADGVS TADVYKVLNT KEGVDRAFAK LGTVKGDLIW YQANAEAARL LADGEVVMSS GSANRFFNAA VSEGKPFTTV WDGQIYDFAM FVIPKGAPHL DEAKKYLAFA TDTKQLAAMA TELPFGPARM SAVPLVHFFK DGKTDIRPHM PTNPDNLKNG LAVSSDFWAD HEAELTERFN AWLATN
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