| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6276 |
|---|
| Symbol | |
|---|
| ID | 6983349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | + |
|---|
| Start bp | 225056 |
|---|
| End bp | 226546 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643399284 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002284040 |
|---|
| Protein GI | 209552124 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0695772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCTG CATTCGGTGG AGCTGTAAAG GCTGCTCCCA AGAGAGGCGG TAACTTACGC
ATTGGCATCG CCGGAGGCAC TTCCGGAGAC AGCCTCGATC CGACGTCAAC GCCGGTCGAC
GCGGGCTTTC TCACGCTCAA TACCATGCGC AGTACGCTTG TCGGGATGAA TGCGAAAGGC
GAGCCCACTC CTTTGTTGGC GGAGAGCTGG GAGCCATCGA ATGATCTGAC CAAATGGTAT
TTTAACATCA GGAAAGGCGC GACCTTCCAC AGCGGCAAAT CGGTGACGGC TGACGATGTG
GTCGCATCGC TCAATCTGCA TCGCGGTGAC AAGACAACTT CGCCGGCAAA AGCTCTCCTT
GATCCAGTTA CAAATGTCGA GGCCGATGGT CCTAACCGGG TCGTCATCAC GCTCAACCGT
GCGAACATTG AGTTTGTTAG CCTTTTCAAA ACGGATTTCC TGGTCATACT GCCTTCTAAG
GATGGCGTAA TCGACCGTGC TAGCAAGGAT GGGACAGGTC CATATGCACT TGAAAGCTTT
GAACCTGGTC AGCACCTCAG TTTCAAGCGA AATCCAAACT ATTGGGATCT TGACAATTAC
GGCTTCTTCG ACTCAGCGGA AGTCGTTGTC ATTGCGGACC CAGCCGCCCG CATGAACGCC
CTGCGCTCGG GTCGGGTCGA TCTTGTTAAC TCGGTAGATC TAAAGACCGC CGCGATGCTG
AAGCGCGTTG CAGGCCTTAA GCTAGAAAAC ATTCCGAGCG GATTGTACTA CGGCATGCCG
ATGCTTGTCG ACGTTGCTCC GTTCAATGAT AATAATGTCC GTATGGCTCT GAAGTACGCG
ATCAAACGGC AGGAAATCGT TGACAAGGTC CTTCTTGGCC ACGGAACTGT GGGCAACGAC
CAGCCAATCT TCAAGAACGT CAAGTTTGCC GCGACGGACC TCCCGCAACG GGAATACGAT
CCGGACAAAG CCCGTCATTA CCTGAAGCAG GCGGGCTATG ATTCAATCGA TCTACCGCTG
AACGTCGCGG AAATTGGCTT CCCGGGCGCG ACCGCTGTTA GTCAGCTGTT CGCCGCTTCG
GCCAAGGCAG CTGGGATCAA CCTCAACGTT ACGAGAGAGC CCGACGACGG TTACTTCGAA
CGCGTATGGA TGAAGCAACC GTTTACAACC GCCTATTGGC ATCAGGCCGT GACGGCTGAC
TCCCGCTTTA CCGAGGCTTT CCTGCCTGGT GCTGCTTGGA ACGAAACTCA CTTCAACAAC
CCACGCTTCA ACGAGCTTGC CGTAAAGGCG CGCGAGACCG TGGACGAGAA CACCCGAGCC
GGTATGTATC ATGAAATGCA GCGCATCATA TACGACGAAG GCGGCCTCTT GAACCCTGTG
TTCGCCAACT ACGTCTGGGC AATGAAGGAT AACGTTCACC GCCCCGACGA TGTGACCACT
CTTGGAGACT TGGACTCGTT CCAATGCATT TCTCGCTGGT GGATGGCTTA A
|
|---|
| Protein sequence | MTAAFGGAVK AAPKRGGNLR IGIAGGTSGD SLDPTSTPVD AGFLTLNTMR STLVGMNAKG
EPTPLLAESW EPSNDLTKWY FNIRKGATFH SGKSVTADDV VASLNLHRGD KTTSPAKALL
DPVTNVEADG PNRVVITLNR ANIEFVSLFK TDFLVILPSK DGVIDRASKD GTGPYALESF
EPGQHLSFKR NPNYWDLDNY GFFDSAEVVV IADPAARMNA LRSGRVDLVN SVDLKTAAML
KRVAGLKLEN IPSGLYYGMP MLVDVAPFND NNVRMALKYA IKRQEIVDKV LLGHGTVGND
QPIFKNVKFA ATDLPQREYD PDKARHYLKQ AGYDSIDLPL NVAEIGFPGA TAVSQLFAAS
AKAAGINLNV TREPDDGYFE RVWMKQPFTT AYWHQAVTAD SRFTEAFLPG AAWNETHFNN
PRFNELAVKA RETVDENTRA GMYHEMQRII YDEGGLLNPV FANYVWAMKD NVHRPDDVTT
LGDLDSFQCI SRWWMA
|
|---|
| |