| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6263 |
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| Symbol | |
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| ID | 6983336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011370 |
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| Strand | - |
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| Start bp | 206691 |
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| End bp | 207530 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643399272 |
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| Product | Shikimate dehydrogenase substrate binding domain protein |
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| Protein accession | YP_002284028 |
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| Protein GI | 209552112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00180016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.468093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAT TATGTCGAGC GCAAATTAAG AAAGACACGG CGTTGGAAAT CACAGGCAAG
ACAAAGATCT TCTACATGAT CGCACATCCG ATTGATCACG TTCGTTCGCC GGAAGTATTC
AACCCCTGGT TCAGAGAAAA CGCCGTGGAC GCGGTGATGA TCCCGGTTCA CTATCGCCCG
GACGACTTCG AGGCCGTTTG GGACAGTTTG CGACACACAG CAAACCTAGG CGGCTTCATG
GTAAGCGTGC CGCACAAGGA GAAGGCCTAT CAACTTTGCG ACGAACATCA CGAAACGGCA
GAGCTTGTCA CTGCGGTGAA TGCCGTCAGG CGTGACGAGC ATGGGCGCCT GACAGGAGCA
AATTTCGATG GTCCCGGCTT TATGGCAGGT GTTCTCGCTG GCCCTCATGA GGTCTCGGGG
AAATCTGTCC TATTGGTAGG CGCCGGCGGA GCAGGAGCCT CGATCGGCTT CCAGGTCGCA
AAGGCAGGAG CTGAACGGAT CACCATCAGC GATCTCAACA CCTCACGCGC AACGGAGCTT
GCGGATAGAA TTCTTGCACG CTTCCCGAAG GTGAATGTGC GACTGGGGAG CATTGACCCG
AAGGGGCACG ACATCGTCGT CAATGCGACG CCGTGCGGCC TCCATCCAGA AACAGATTCG
ATTCCCGTTG AGCTCGACAA TATCTCATCC GACATGATTA TTGCGGACAT CATCATGAAA
CCACGCGTCA CGCCATTGCT TGCAGCGGCG AAGGAGATCG GGTGCGACGT CCGCTATGGC
GGCGGCATGC TCGATATGCA GCGCGACCTA ACGCTGAAAT TCTACGGGTT GAAGATCTGA
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| Protein sequence | MSTLCRAQIK KDTALEITGK TKIFYMIAHP IDHVRSPEVF NPWFRENAVD AVMIPVHYRP
DDFEAVWDSL RHTANLGGFM VSVPHKEKAY QLCDEHHETA ELVTAVNAVR RDEHGRLTGA
NFDGPGFMAG VLAGPHEVSG KSVLLVGAGG AGASIGFQVA KAGAERITIS DLNTSRATEL
ADRILARFPK VNVRLGSIDP KGHDIVVNAT PCGLHPETDS IPVELDNISS DMIIADIIMK
PRVTPLLAAA KEIGCDVRYG GGMLDMQRDL TLKFYGLKI
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