| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6257 |
|---|
| Symbol | |
|---|
| ID | 6983330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011370 |
|---|
| Strand | - |
|---|
| Start bp | 199061 |
|---|
| End bp | 199723 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643399266 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002284022 |
|---|
| Protein GI | 209552106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000235242 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.70096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACC TCGACTTCTT TTTCGCGATT TCGTCGGGAC ACCAGTTGCT CGACGGTCTC
TGGGTCACTT TGTACCTGAC ATTCTGGTCG AACGTCATTG GCCTCACGTG CGGCTTCCTC
CTGGCGCTGG TCGGAGTGTC CCGAGCATGG CCGCTTCGTT GGCTCTACAC CGCCTATGTC
GAGATCTTTC GCTGCACGCC GATCCTGCTG CAAATTGTCT GGTTTTTCTT CTGCGTCCCG
ATCCTGTTCA ATGTCTACTG GTCGGGGGAG TTCTTGGGCC TTCTGATCCT CGGACTCAAT
CTAACTGCGT TCAACGCGGA AGCGTACCGG GCCAGCATCC AGGGAATTCC GCCCGCTCAC
CACGATGCAG CGATCGCTCT TGGACTGGGC AAGCGGGTGA CGGCAATGTA TGTGATCATG
CCCCAAGCAG CCCGCAATGC CATGCCTGTT CTCGTGACCA ATGCCATCGG TGCATTCCAG
CAAAGCGCAC TTGTAGCACT CGTTGGCGTC GCGGATCTCA TGTATCAGGG CAAGCTGCTG
TCGACACAGA CGTACCGCCC AATCGAAGCG TACACGAGCG TCGCAATCAT CTATCTCGTG
ATATCGGTGA TATTCGGCCA GATCGCCGGG TTCATTGAAC GACGCAACGA ACTCTATCGA
TAG
|
|---|
| Protein sequence | MQNLDFFFAI SSGHQLLDGL WVTLYLTFWS NVIGLTCGFL LALVGVSRAW PLRWLYTAYV
EIFRCTPILL QIVWFFFCVP ILFNVYWSGE FLGLLILGLN LTAFNAEAYR ASIQGIPPAH
HDAAIALGLG KRVTAMYVIM PQAARNAMPV LVTNAIGAFQ QSALVALVGV ADLMYQGKLL
STQTYRPIEA YTSVAIIYLV ISVIFGQIAG FIERRNELYR
|
|---|
| |