Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6256 |
Symbol | |
ID | 6983329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | - |
Start bp | 198384 |
End bp | 199052 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643399265 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002284021 |
Protein GI | 209552105 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.018677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.932085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTT TTGATATCAC GTTCGTTGCG AAGTACTGGC AGACCCTATT ATCAGGCTTG GGTCTCACAC TTGAGTTCAC TGCTATCTGC ATCGTATCAG GCACGTTACT CGGCTTGCTT CTCGCCCTAA TGTCACGCTC GCCGAATGCC CTTGTTCGCA CGCTGGTTAG AATGTACGTC GAACTCATCC GCGGCGTGCC CGTTCTCATT CTGCTGTTCT GGATCTTCTT CTGTCTCCCA GTTGTGACAG GCCTGGAAAT CAGCAACTTC TTCTCGTCGA CTCTAGCACT GACTTTGTTC ATGGGAGCCG CCACTTGCGA ATCCTTCCGA GCAGCATTGA AGTCGATCCC GCATGAACAG TACGATGCTT GCACGGCGCT AGGCTTGACC AACAAGTCAA GGCTTCTCGA CGTTGTTGTG CCTCTGATGG CGATGCGCGC GATTCCCAAT CTGCTGTCGA ACACGGTCGC TCTGTTCAAA GAGAGTTCGC TCGCGTCGGC GGTTGGGACC GTAGAGCTGA TGTACATTGG TCAGAACATC GCGAATTCGA CTGCACGCCC CATCGAAGTG CTCACCGTAG TGGGTATCCT CTACTTCATT GTCGGCTTCG TACTTACCCG CCTTGTTTCC CTCGCAGAAA CACGGGTTCT CAGCCGCCTC GCAACCTGA
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Protein sequence | MASFDITFVA KYWQTLLSGL GLTLEFTAIC IVSGTLLGLL LALMSRSPNA LVRTLVRMYV ELIRGVPVLI LLFWIFFCLP VVTGLEISNF FSSTLALTLF MGAATCESFR AALKSIPHEQ YDACTALGLT NKSRLLDVVV PLMAMRAIPN LLSNTVALFK ESSLASAVGT VELMYIGQNI ANSTARPIEV LTVVGILYFI VGFVLTRLVS LAETRVLSRL AT
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