Gene Rleg2_6212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6212 
Symbol 
ID6983285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp154341 
End bp155174 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID643399224 
ProductConjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_002283980 
Protein GI209552064 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0737983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAT GCGCCGCCGC ATTTTCCCTC GTTCTGCTCA TGACCCCAGC AGTCGCTCAT 
GGCGAGCTCC TGGCACGGCC GGGCCGGCTT GACCCGCGCG TCCGGTCACT TCCCTATTCC
GCCGAGCAGG TATTTCTCGT CACCGGCACC TATGGGCTTG TCACGACCAT TCTCTTCGGT
ACTGACGAGG AAATCACACA GGTCGTCGCG GGCGACACCG TCTCCTGGCA GATCCTCACT
TCGGCCGACA GGCGTTCGTT GACATTGAAG CCGATGGAGA AGGACGCGGC GACCAATCTG
TCGGTTGTGA CCACGAAGCG AACCTATTCC TTCGATCTGC GCGTCAACGA CAGCAAGGCG
ATGCAGAACC AGACCTTCAA GCTGACATTC ACCTATCCGG AAGATGCCGG CCTGAAAGGA
ACTGCCGAGC TCTGGAAACA GGCCCAGGAT GCCGAGCGCA ATCCGAACAT CAAGAACATT
CGTCGCGACA AGGTCAATTA CGACTATGGC TTCAAGGGCA ACGATGCCGC CAAGCCCCTG
TGGGTCTTCG ACGATGGGGT GAAGACCTTC ATGAAGTTCA CCGGCGACAT CCCGGCGATC
TTCATCGTCG ACCCCAAGCG GCGCGAGAGC CTCGTGAACT ATCGTCGGGA GGCCGATTAC
ATCGTCATCG ACAAGGTCTC GCGGCAGTGG TCCCTGCGGT ATGGGACCGA GGAGGAGACC
TGCCTGTTCA ATCTGCGGAC TTCTCCCGCC GACACCCCGG CGCCCATCGA AGGCGCCGTC
GCTCCGAAGC GGATTGGAGC CGGAGCCGCC AACCAGCAAC CCCAATCACG ATAG
 
Protein sequence
MKRCAAAFSL VLLMTPAVAH GELLARPGRL DPRVRSLPYS AEQVFLVTGT YGLVTTILFG 
TDEEITQVVA GDTVSWQILT SADRRSLTLK PMEKDAATNL SVVTTKRTYS FDLRVNDSKA
MQNQTFKLTF TYPEDAGLKG TAELWKQAQD AERNPNIKNI RRDKVNYDYG FKGNDAAKPL
WVFDDGVKTF MKFTGDIPAI FIVDPKRRES LVNYRREADY IVIDKVSRQW SLRYGTEEET
CLFNLRTSPA DTPAPIEGAV APKRIGAGAA NQQPQSR