Gene Rleg2_6187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6187 
Symbol 
ID6983260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp127390 
End bp129525 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content61% 
IMG OID643399200 
ProductParB domain protein nuclease 
Protein accessionYP_002283956 
Protein GI209552040 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00276297 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCACAGG CCATCCAGAA AATCACGCTC AGCAGTGGAC GTGACATTCC CTTCAACAAG 
CTCGTCTTGA GCCAGCAGAA TGTCCGCAAG ATCAAGGCGG GCATTTCTAT CGAGGATCTC
GCGGAAGATA TCGCCCGCCG GGGACTTTTG ACCAGTCTCA ATGTCCGCCC CGAGCTCGAT
GGCGACGGCA ACGAGACAGG CATCTACCGC ATTCCGGCCG GCGGCCGGCG CTATCGGGCG
CTCGAATTGC TCGTCTCCCA GAAACGGCTT TCAAAAACCG CCGGCGTGCC CTGCATCGTC
AGCAGCGGCG AAACGCCGGA GATCGAAGAT TCGCTCGCCG AGAACGTGCA GCGTGTCGAC
CTTCACCCTC TCGACCAGTT CAGGGCATTC CAGAGCTTGC GCGAGCAGGG GCAGAGCGAA
GAAGACATCG CCGCCCGCTT TTTCGTCTCG GTCGCGACGG TGCGACAGAG ATTGCGATTG
GCCTCCGTTT CGCCGCGGCT GCTCGATCTT TACGCGGCCG ACGAGATGAC CCTGCAGCAG
GTAATGGCCT TCTCGATCAC CAACGATCAT GTTCGTCAGG AGCAGGTCTG GGATACCGTT
TTGCGGTCTC ATGCCCAGGA GCCCTACTAT ATCCGCAGGC TCCTGACCGA GACGACAATC
CGGGCGACCG ACCGCCGCGC CGTCTATGTC GGCCTCGAGG CTTATGAAGC TGCCGGCGGT
GTGGTCATGC GCGACCTCTT CGATGAGGAC AATGGCGGAT GGCTCCAGGA TCCGGCGCTG
CTCGAGCAAT TGGTGATCGA GAAGTTGAAG ACAGATGCAG AGGCACTCAA GGCCGAGGAA
GGCTGGAAGT GGGTCGAGGC CGCCTTCGAC TTCCCCTACG GTCATACATC CGGGCTGCGC
CGCTTCTACG GCGAGCAGGC CGAGATGACC CAGGCGGAAC TCGATCGTCA TGACACGTTG
AGGACCGAAT ACGACAAACT CGACGCGGAC TATGCCGAAG CCGAGGACTA TTCCGAGGAG
ACCGAGCGCC GCTTGGAGAA ACTCGGAGCC GAGCTCGACG AGCTGAATGA TCGGCCCTAC
GTTTTCGATC CTGAAGAGGT TGCCCGCGGT GGTGCCTTCA TCTCGCTTGC TGCCAGTGGC
GAGCTGAAAA TCGAACGGGG GTTCGTCAGA AGCGAGGATG AGCCGCCGGT CGAAACAACC
GATGCGGATG CAGCAGGATT GGACGCCAAC AATAACAATC CGATGCCCGC ATCGTCTGCA
GGCGGGATTT CCGTGAATGG TCAGGCGGTC TCTGGTGAGC CCGCGGAGGA TGACGACGAC
GTCGTCAGGC CATTGTCCGA TCGGCTTGTC GTGGATCTGA CGGCGACGCG AACGGTCGCG
CTGCGCAATG CGCTTGCCAA TGAACCGGTC ATCGCGTTAA TCGCGGTGCT GCACGCCTTC
GTCCTGAAGA CCTTCTATCT CTACGGCTCC GACTCATGCC TGGAACTGAC GCTCCAGAGC
GCCAGGTTCA CCCAGACGCC TGGGCTTGGT GACACCGTGT GGGCCAAGGA AATCGATCAG
CGGCACGAAG CCTGGGGCCA GGATCTCCCG AAATCGCCCG ACGACCTCTG GACCTTTCTG
ATCGCGCTCG ATGAGGTCAG CCGACAAGCC CTGTTTGCCC ATTGCGCCTC GTTGTCGCTC
AATGCGGTCA CCGAGCCGTG GAACAAGCGC ACACGTGCGA TTGCTCATGC GGACCAGGTC
GCCCATTCGA TTGGTTTCGA CATGGTCGCG GCGGGCTGGG GGCCGACAGT GGATTCCTAT
CTCGGCCGTG TCACCAAGTC GCACATTCTC CAGGCGGTCC GTGAGGCGAA GGGTGATCAA
TCAGCGGAGC TGATCGGCCA TCTGAAGAAG ACCGATATGG CCCGCGAGGC TGAACGGTTA
ATGGCCGGCA GCGGTTGGCT TCCGGAGCCT CTCCGTCTCG CGGCAGGTCT CGCTTCCGTC
GACGAATCGG CGTTCGAAAA CGCCGAGATT TCCCATGACG GCGCCACCGA GACCGAGAAT
CTCGAACTTC CGGCATTCCT GACCGAGGAT ACCGATGAGG TGTCCATGCC GACGGACGAG
CGCGACGAAC AGCAGCATCT CGACGCGGCG GAATAA
 
Protein sequence
MAQAIQKITL SSGRDIPFNK LVLSQQNVRK IKAGISIEDL AEDIARRGLL TSLNVRPELD 
GDGNETGIYR IPAGGRRYRA LELLVSQKRL SKTAGVPCIV SSGETPEIED SLAENVQRVD
LHPLDQFRAF QSLREQGQSE EDIAARFFVS VATVRQRLRL ASVSPRLLDL YAADEMTLQQ
VMAFSITNDH VRQEQVWDTV LRSHAQEPYY IRRLLTETTI RATDRRAVYV GLEAYEAAGG
VVMRDLFDED NGGWLQDPAL LEQLVIEKLK TDAEALKAEE GWKWVEAAFD FPYGHTSGLR
RFYGEQAEMT QAELDRHDTL RTEYDKLDAD YAEAEDYSEE TERRLEKLGA ELDELNDRPY
VFDPEEVARG GAFISLAASG ELKIERGFVR SEDEPPVETT DADAAGLDAN NNNPMPASSA
GGISVNGQAV SGEPAEDDDD VVRPLSDRLV VDLTATRTVA LRNALANEPV IALIAVLHAF
VLKTFYLYGS DSCLELTLQS ARFTQTPGLG DTVWAKEIDQ RHEAWGQDLP KSPDDLWTFL
IALDEVSRQA LFAHCASLSL NAVTEPWNKR TRAIAHADQV AHSIGFDMVA AGWGPTVDSY
LGRVTKSHIL QAVREAKGDQ SAELIGHLKK TDMAREAERL MAGSGWLPEP LRLAAGLASV
DESAFENAEI SHDGATETEN LELPAFLTED TDEVSMPTDE RDEQQHLDAA E