Gene Rleg2_6147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6147 
Symbol 
ID6983220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp82451 
End bp83470 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content61% 
IMG OID643399165 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_002283921 
Protein GI209552005 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.372275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGT ATCAGGTCGA GTGCCGCAAT CTCTGGAAGA TATACGGCGC GCAAGTACAG 
GCGGCGACCA AGGCCGTTCG CGCGGAAGAG CTGACAAAGA CGGAAGTCCG AGATCGTTTT
GGCTGTGTGG TAGGGGTCCG CGACGCGAGC TTCTCCATCA AGCGTGGCGA AATCTTCTGC
ATCATGGGCT TGTCGGGTTC CGGCAAGTCC ACCGTCATCC GGCATATAAA CCGCCTGATT
GAACCGACCT CGGGTGAAGT CTATGTGAGC GGCCGTCGGG TCGACACCAT GGACGAGCAG
GCACTTCGCA ACTTGAGGTC GGAGACCATG GGGATGGTGT TCCAGCACAT GGCGCTGTGG
CCCCACCGCA ATCTCGCCGA CAACGTGGCA TATGGGCTGG AATGTCGGTC CGTGCCCAGG
AAAGCACGGC TTGAGGCAGC GGAGCGGGCG CTCGCCTCCA TGGGGCTGCA AGGATGGTCA
AACCATTATC CAGACCAGCT CTCGGGTGGG ATGCAACAGC GCGTAGGCAT CGCCCGCGCA
CTGGCGGCCG ACCCCGCGAT CCTGCTGATG GACGAACCGT TCTCGGCTCT TGACCCGCTC
ATCCGACGCC AGCTGCAGGA TCAGTTTCTC GAGCTGTCCT CGCAGCTTCA GAAGACAACG
ATCTTCGTCA CTCACGACCT GGACGAGGCG ACCCGGATGG GACATCGCAT GGCGATCATG
AACGATGGTG TCATCGTCCA GATCGGGACG CCGGAGGAAG TGGTTCTGAA CCCTGCCGAC
GACTATGTCC GCGAGTTCGT GAAAGGCATT TCGAAAGCCA ACCTAGTCCG CGCGCGGACG
ATCATGTCCG CGATGGTCGC GCCTTATGTG AGCGAGAGGA GCGTCGCCGA AAACTGCGAA
CTTGGTGCGT TGCTGGACGA GTTTGTGGAG GATCAGTCGC CAGTCACCGT CATCGACGGG
GCCGGCAATC CGGTGGGCCA GATCACGATC AACGCAGCGC TCAAGGCGTT GCGGGGCTAG
 
Protein sequence
MTEYQVECRN LWKIYGAQVQ AATKAVRAEE LTKTEVRDRF GCVVGVRDAS FSIKRGEIFC 
IMGLSGSGKS TVIRHINRLI EPTSGEVYVS GRRVDTMDEQ ALRNLRSETM GMVFQHMALW
PHRNLADNVA YGLECRSVPR KARLEAAERA LASMGLQGWS NHYPDQLSGG MQQRVGIARA
LAADPAILLM DEPFSALDPL IRRQLQDQFL ELSSQLQKTT IFVTHDLDEA TRMGHRMAIM
NDGVIVQIGT PEEVVLNPAD DYVREFVKGI SKANLVRART IMSAMVAPYV SERSVAENCE
LGALLDEFVE DQSPVTVIDG AGNPVGQITI NAALKALRG