Gene Rleg2_6140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6140 
Symbol 
ID6983213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp76009 
End bp77409 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content56% 
IMG OID643399159 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002283915 
Protein GI209551999 
COG category[R] General function prediction only 
COG ID[COG3800] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.29056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.20843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCG GGAAACTATT TATCGGCAAA AAAGTGCGGG AGTTGAGACT CCTCCACAAA 
GCAAATCAAT CGCAGTTTGC AGAGCGTCTT GGGATTTCGA CGAGCTACCT GAACCAAATC
GAGAGCAATC AGCGGCCTGT GTCTGCCGCG GTCCTTCTCG CCCTTGTCGA CAAGTTCCAA
CTGGACATGT CGGATCTTGC CACCGGGGAA ATCGACCGGC TGCTTTCCGC TTTCTCCGAA
GCACTTACTG ATCCGTTGTT CGAAGGCTAT GCCCCGAGCT TTCAGGAGCT GAAGCTTGTC
GTTCAAAACG CTCCCGGCGT CGCCCATGCT CTCATCAAAG CCCATCAAGC CTATCGCCGG
GTCAGCGAGC AACTGGCTAG CATCGATCGG GAATTGACCA GAGGAATGCC AGAAACCACG
CCCTACGAAG AGGTGCGCGA CTTCTTTCAT TTCGTTGACA ATTATGTGCA CGACCTGGAT
GTCGCTGCTG AACGTCTTGC GAGCGAGTTG CGGCAGGCAG ATGACCGGCA GGGGGGATTG
AAGCGGCGCC TGGAAACCGG GCATGGTGTG CGGATCAGCT ACGATCTGGA GGGGGACGCA
CTGCGCACGT TCCACGCTGC AAATATGATG CTCCACCTGA ACAAGTATTC ACCGCTCCAT
ACACAGCAGT TCCAGATGGC GATTCAACTT GCCCAGCTCG AAGCGGCGAA CGCAATCGAT
GAGATCGTTG GGAGCGCCGG ATTTCGGTCG GCTGAGGCGG CGGAGGTGTG CAAGATAGGC
CTGCAGAATT ATTACGCAGG CGCGCTCCTC ATGCCCTATC GCGAATTCCT GGAGGCGGCG
AGGCTTCACA GGCATGATGT GCATCTGCTT TCGTTAAGAT TCAACACGTC GCTGGAGCAG
GTCTGCCATC GCCTGTCCAC CCTGCAACGC CCCGGACAGA AAGGAATTCC GATCTTTTTT
GCCAAAATCG ACAGGGCCGG CAACATTACC AAGCGCCACA GCGCGACGAA GCTGCAGTTT
GCCCGGTTTG GTGCCGCCTG TCCTTTGTGG AATGCTCATC AGGCCTTCGA GTCCCAGGGG
CGGATCATCA GACAGCTTGC GGAAACGCCG GATGGCGGAC GTTTCCTCTC GATAGCCTTG
CAGGTGAACA AGCGATCAGG AGGGTATACA TCCCATGATA CGACATATGC CTTGGCCCTT
GGCTGCGAGA TAGGAGATGC CAGCGCCTTT ATATACGCGG ACGATCTCGT TGGACTCTCT
CAGCCGCGAT ACGATCAGAT AGGTGTGTCC TGCAGGATCT GCGAGCGCGT CAAATGTCCC
AGTCGAGCCG CGCCGCCCGT CAAAAGGAAG ATCGGCATCG ATCATCATCA ACGCATGGCA
TTGCCCTACG ACATCAACTG A
 
Protein sequence
MAIGKLFIGK KVRELRLLHK ANQSQFAERL GISTSYLNQI ESNQRPVSAA VLLALVDKFQ 
LDMSDLATGE IDRLLSAFSE ALTDPLFEGY APSFQELKLV VQNAPGVAHA LIKAHQAYRR
VSEQLASIDR ELTRGMPETT PYEEVRDFFH FVDNYVHDLD VAAERLASEL RQADDRQGGL
KRRLETGHGV RISYDLEGDA LRTFHAANMM LHLNKYSPLH TQQFQMAIQL AQLEAANAID
EIVGSAGFRS AEAAEVCKIG LQNYYAGALL MPYREFLEAA RLHRHDVHLL SLRFNTSLEQ
VCHRLSTLQR PGQKGIPIFF AKIDRAGNIT KRHSATKLQF ARFGAACPLW NAHQAFESQG
RIIRQLAETP DGGRFLSIAL QVNKRSGGYT SHDTTYALAL GCEIGDASAF IYADDLVGLS
QPRYDQIGVS CRICERVKCP SRAAPPVKRK IGIDHHQRMA LPYDIN