Gene Rleg2_6122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6122 
Symbol 
ID6983195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp54800 
End bp55951 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID643399144 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_002283900 
Protein GI209551984 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.476523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.155201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCT CCCATCCGCT TTCAGGCATA ACGGTGGTAA GCATCGAGCA TGCTATCGCA 
GCGCCGTTTT GCACGCGCCA TCTCGCCGAT CTGGGCGCGC GGGTAATAAA GGTTGAGAGA
CCGGGCGAGG GCGATTTCGC CCGCGCGTAT GACAACCGCG CCCGCGGGAT GGCCTCGCAT
TTCGTGTGGG TCAACAGATC GAAGGAAAGT CTCGCACTCG ACTTGAAAAA CTCTGAGGAA
CTCGAAGCGC TACATCACTT GTTGGAGTCG GCCGATGTGT TCGTCCAGAA TCTCGCTCCG
GGCGCTGCGG ACCGGATGGG TCTCAATTTC GATACTCTTT CAAAACGCAA CGCCGGCCTG
ATTGTGTGCG ATATCTCCGG CTATGGCTCG AATGGGCCCT ACCGCGGAAA AAAGGCATAT
GACCTTCTTA TTCAGAGCGA AGCGGGTTTC CTGTCCGTCA CGGGGACCGA GGGTGGGCCG
GTCAAGGCCG GATGCTCCAT AGCCGATATA TCGGCGGGCA TGTATGCTTA TAGCTCGATT
TTGGCAGCCC TGATCCAGCG CGGCAAATCG GGGAAGGGAT GCCGCATCGA CGTCTCGATG
CTGGAGTGCA TGGCAGAGTG GATGGGGTTC CCTCTCTACT ACGCTCTCGA TGGCGCTCCG
CCGCCAATTC CGTCCGGGGC ATCGCACGCA AGCATATTCC CGTACGGTCC TTTCGCCGCT
GGAGACAAGC GAACGGTGAT GCTCGGAATC CAAAACGAAC GCGAATGGGC TAAATTCTGC
GAACAAGTTC TGGAGCAGCC CGAACTTCGA AATGATGATC GGTTCGACAC AAACTCAAAA
CGCTCGGCGG CAAGGGCTGA ACTAACTGAG ATCATCCTCC AAGCTTTCGC GCCTCTTACC
GCCCAGGAGG TTATTGCTCG GCTCGAGAAG GCGGACATCG CCAATGCGGA GGTGAGGAAC
ATGCAGCAGG TGTGGGATCA CCCGCAGTTG CGCGCGCGCG GCCGATGGAT GGAAATCGAT
ACTCCGGTGG GTCCGATGCC TGCGCTTATG CCCCCCGGCT TACCTGATGG CGTCGCACCT
TACATCGGCC CTGTCCCCCG CGTTGGCCAG CACAATGAAG CAATACTCGG GGAGTTGAAG
GCGCCGGCAT GA
 
Protein sequence
MQTSHPLSGI TVVSIEHAIA APFCTRHLAD LGARVIKVER PGEGDFARAY DNRARGMASH 
FVWVNRSKES LALDLKNSEE LEALHHLLES ADVFVQNLAP GAADRMGLNF DTLSKRNAGL
IVCDISGYGS NGPYRGKKAY DLLIQSEAGF LSVTGTEGGP VKAGCSIADI SAGMYAYSSI
LAALIQRGKS GKGCRIDVSM LECMAEWMGF PLYYALDGAP PPIPSGASHA SIFPYGPFAA
GDKRTVMLGI QNEREWAKFC EQVLEQPELR NDDRFDTNSK RSAARAELTE IILQAFAPLT
AQEVIARLEK ADIANAEVRN MQQVWDHPQL RARGRWMEID TPVGPMPALM PPGLPDGVAP
YIGPVPRVGQ HNEAILGELK APA