Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4191 |
Symbol | |
ID | 6982964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 4365197 |
End bp | 4366672 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643398922 |
Product | type II secretion system protein E |
Protein accession | YP_002283679 |
Protein GI | 209551762 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGGAA AACGCGGAAA TGAAGGGTCC GGAAAGGTCG GAGGGGCGAT TGCTCCCCCG CCGCCGGCTC CGGCTGCCGC CCCTGCGGCC TCTTCCCCCT CCATTCTGGT CGAACCTTCG CGCGAGCCCG CACGCCAGCA GGTGACGCCG CCGCCGATGC AGACGCCGCA GCGCAAGCGC CCTGTTCGCA CCGATGAATA TTACGACACC AAGGCGCAGG TCTTTTCCGC GCTGATCGAT ACGATCGATC TCTCGCAGCT TTCCAAGCTC GACGGCGAAA GCGCACGCGA AGAAATCCGC GACATCGTCA ACGACATCAT CACCATCAAG AACTTTGCGA TGTCGATCTC CGAGCAGGAG GAACTGCTCG AGGATATCTG CAACGACGTC CTCGGCTACG GTCCGCTGGA GCCGTTGCTG GCGCGTGACG ACATCGCCGA CATCATGGTC AACGGCGCCG GCCAGACTTT CATCGAAGTC GGTGGCAAGA CGATCGAATC GGAGATCCGC TTCCGCGACA ATGCGCAGCT TCTCTCGATC TGCCAGCGCA TCGTCAGCCA GGTCGGCCGC CGCGTCGACG AATCGAGCCC GATCTGCGAC GCCCGCCTGC CTGACGGCTC GCGCGTCAAC GTTATCGCGC CGCCGTTGTC GATCGACGGG CCGGCGCTCA CCATCCGCAA ATTCAAGAAG GACAAACTGA CGCTCGATCA GCTCGTCCGT TTCGGTGCGA TCACCGCGGA AGGCGCGACC GTGCTGCAGA TCATCGGCCG GGTGCGCTGC AACGTCGTCA TCTCAGGCGG TACCGGCTCG GGCAAGACGA CGCTGCTGAA CTGCCTTACC AACTATATCG ACAGGGATGA ACGCGTCATC ACCTGCGAGG ATACCGCCGA ACTGCAGCTG CAGCAGCCGC ATGTCGTGCG TTTGGAAACG CGCCCGCCGA ATATCGAAGG CGAGGGCGAG ATCACCATGC GCGATCTCGT CAAGAACTGC CTGCGTATGC GTCCCGAGCG CATCATCGTC GGCGAAGTGC GCGGACCTGA AGTTTTCGAC CTTTTGCAGG CGATGAACAC CGGTCACGAC GGCTCTATGG GCACCATCCA CGCCAACACG CCGCGCGAAT GCCTGAGCCG TATCGAATCG ATGATCGCCA TGGGTGGCTT CACCCTGCCG GCAAAGACGG TGCGCGAGAT CATCTCCAGC TCGGTTGATG TGATCATCCA GGCGGCGCGC CTCCGCGACG GCTCGCGCCG CATCACCCAG ATCACCGAGG TGATCGGCAT GGAAGGCGAC GTCATCATCA CCCAGGACCT GATGCGCTAT GAGATCGAAG GCGAAGATGC CGGCGGCCGC CTGATCGGCC GGCACATGTC GACCGGCGTC GGCAAACCGC ATTTCTGGGA TCGCGCCCGC TACTTCAACG AGGAAAAGCG CCTAGCCGCT GCCCTCGACG CGATGGAAGC GAAAACGAAG GATTAG
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Protein sequence | MFGKRGNEGS GKVGGAIAPP PPAPAAAPAA SSPSILVEPS REPARQQVTP PPMQTPQRKR PVRTDEYYDT KAQVFSALID TIDLSQLSKL DGESAREEIR DIVNDIITIK NFAMSISEQE ELLEDICNDV LGYGPLEPLL ARDDIADIMV NGAGQTFIEV GGKTIESEIR FRDNAQLLSI CQRIVSQVGR RVDESSPICD ARLPDGSRVN VIAPPLSIDG PALTIRKFKK DKLTLDQLVR FGAITAEGAT VLQIIGRVRC NVVISGGTGS GKTTLLNCLT NYIDRDERVI TCEDTAELQL QQPHVVRLET RPPNIEGEGE ITMRDLVKNC LRMRPERIIV GEVRGPEVFD LLQAMNTGHD GSMGTIHANT PRECLSRIES MIAMGGFTLP AKTVREIISS SVDVIIQAAR LRDGSRRITQ ITEVIGMEGD VIITQDLMRY EIEGEDAGGR LIGRHMSTGV GKPHFWDRAR YFNEEKRLAA ALDAMEAKTK D
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