| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4179 |
|---|
| Symbol | upp |
|---|
| ID | 6982952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 4354608 |
|---|
| End bp | 4355237 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643398910 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_002283667 |
|---|
| Protein GI | 209551750 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG TCACGGTCAT CGATCATCCG CTTGTGCAGC ACAAGCTCAC CATCATGCGG
CGCAAGGAGA CATCGACGGG AAGTTTCCGG CGATTGCTGC GCGAAATCTC CACACTGCTC
TGTTACGAGG TGACCCGCGA TCTCGAACTG ACGATGGAAA CGATCGAGAC GCCGCTGCAG
ACGATGGAAT CGCCGATCCT CGAGGGCAAG AAGCTGGTCT TCGCCTCGAT CCTGCGCGCC
GGCAACGGGC TGCTCGAGGG CATGCTCGAT CTCGTACCCT CAGCCCGCGT CTCGCATATC
GGCGTCTACC GCGACCACGA GACGCTGCAG CCGGTCGAAT ATTACTTCAA GGCGCCTGAA
GATGTGGCCG AGCGCCTGAT CATCGTCGTC GATCCGATGC TGGCGACCGG CAATTCCTCG
ATCGCCGCAA TCGACAAGCT CAAGGAACGC GGCGCCCACA ATATCCGCTT CCTCTGCCTG
CTCGCCGCCC CGGAAGGCAT CCAGAACTTC CGCGCCGCCC ATCCAGACGT TCCTGTTTTC
ACCGCCTCGA TCGACAGTCA TCTCAACGAG AAGGGCTATA TCGTGCCCGG CCTCGGCGAT
GCCGGCGACC GCATGTACGG CACCAAATAA
|
|---|
| Protein sequence | MDGVTVIDHP LVQHKLTIMR RKETSTGSFR RLLREISTLL CYEVTRDLEL TMETIETPLQ
TMESPILEGK KLVFASILRA GNGLLEGMLD LVPSARVSHI GVYRDHETLQ PVEYYFKAPE
DVAERLIIVV DPMLATGNSS IAAIDKLKER GAHNIRFLCL LAAPEGIQNF RAAHPDVPVF
TASIDSHLNE KGYIVPGLGD AGDRMYGTK
|
|---|
| |