Gene Rleg2_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4142 
Symbol 
ID6982914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4323143 
End bp4324348 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content63% 
IMG OID643398872 
Productintegrase family protein 
Protein accessionYP_002283630 
Protein GI209551713 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAAAT TGACCGCGAA GCAGGTCACA AGCATCAAGA AGCCGGGCCG TCATAGCGAC 
GGCGGAAGCC TCTATCTTGT CGTCGACAAG TCCGGCGCCA AGCGGTGGGT GTTCCTGTAT
CGCCGCGGCG ATCGCCAGCG CGAAATGGGC TTGGGCGGCG TCGATACTGT ATCGCTGGCG
AGCGCGCGCG AGCTGGCCGC GGATGCCCGC CGGCTGCTGC AGGCCGGCAT TGATCCTATC
GAGGCGAAAA ACGCCATCGT CGACGAGATC CCGACCTTCG GCGATTGCGC CGACGATTTC
ATTGAAACTA TGGCCCCGCA ATTCCGGAAC GCGAAGCATA TCGCGCAATG GAAAATGACC
TTGCAGGAAT ATGCAAAGCC TCTCCGGCCG AAGGCGGTTG ACCAGGTCAC GACTTCCGAC
GTGCTGGAAG TCTTGAAACC GATCTGGCTA ACGAAGCCGG TCACGGCGTC GCGAGTACGT
GGTCGCGTTG AGCGGGTTCT GGACGCGGCA AAGTCAAAAG GCTACCGGTC AGGTGAAAAC
CCGGCGCGCT GGCGCGGCCA CCTGTCAAAC CTGCTGCCGA AGCGCAAGAA GCTGACGCGC
GGCCATCACG CGGCGCTTCC TTACAAGGAC GTGCCTACGT TCACCGCCGC GCTGCGTGAA
CGACCGGCCG TCGCGGCGAG GGCTATGGAA TTCACAATCC TGACCGTGGC GCGGTCCGGA
GAAACGCGGG GCATGAAGTG GCGCGAAGTC GACCGCGTTG ACGAGGTCTG GACGGTGCCG
CCCGAGCGGA TGAAAGCGTT CCGCGAACAT CGTGTTCCGC TTGCGCCGCG GGCGCTGGCG
ATCCTCGATG AAATGGCGCT GTTCGGCACC GATCCGGACG CTTATGTCTT CCCTGGCCAG
CAGAAGAACA GGAAGGGCCG ACCGCTGTCC GACATGGCAA TGGATATGGT GCTGCGGCGG
ATGAAGGTAG ACGTCACAGT CCACGGCTTT CGATCCTCCT TCCGCGACTG GTGTGGCGAA
GAGAGCACCT TCCCTCGAGA AATCGCCGAA GCGGCGCTCG CCCACGTGGT CGGCGACGAG
ACGGAACGCG CCTACCGCCG CGGCGACGCG CTCGAGAAGC GCCGGCGGCT TATGACGGCT
TGGGCGAACT ATTGCGAGCC CAAGACCGGC AACGTCATTT CGCTGAAGCG GCGCGCGGGG
GCCTAG
 
Protein sequence
MNKLTAKQVT SIKKPGRHSD GGSLYLVVDK SGAKRWVFLY RRGDRQREMG LGGVDTVSLA 
SARELAADAR RLLQAGIDPI EAKNAIVDEI PTFGDCADDF IETMAPQFRN AKHIAQWKMT
LQEYAKPLRP KAVDQVTTSD VLEVLKPIWL TKPVTASRVR GRVERVLDAA KSKGYRSGEN
PARWRGHLSN LLPKRKKLTR GHHAALPYKD VPTFTAALRE RPAVAARAME FTILTVARSG
ETRGMKWREV DRVDEVWTVP PERMKAFREH RVPLAPRALA ILDEMALFGT DPDAYVFPGQ
QKNRKGRPLS DMAMDMVLRR MKVDVTVHGF RSSFRDWCGE ESTFPREIAE AALAHVVGDE
TERAYRRGDA LEKRRRLMTA WANYCEPKTG NVISLKRRAG A